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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Rhinopithecus roxellana (Golden snub-nosed monkey) (Pygathrix roxellana)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi495 – 563HMG boxPROSITE-ProRule annotationAdd BLAST69

GO - Molecular functioni

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiRhinopithecus roxellana (Golden snub-nosed monkey) (Pygathrix roxellana)Imported
Taxonomic identifieri61622 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniCercopithecidaeColobinaeRhinopithecus
Proteomesi
  • UP000233200 Componenti: Whole Genome Shotgun Assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini495 – 563HMG boxInterPro annotationAdd BLAST69

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili182 – 202Sequence analysisAdd BLAST21
Coiled coili204 – 262Sequence analysisAdd BLAST59
Coiled coili392 – 419Sequence analysisAdd BLAST28
Coiled coili433 – 453Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00760000119274

Family and domain databases

Gene3Di1.10.30.10, 1 hit
InterProiView protein in InterPro
IPR009071 HMG_box_dom
IPR036910 HMG_box_dom_sf
PfamiView protein in Pfam
PF00505 HMG_box, 1 hit
SMARTiView protein in SMART
SM00398 HMG, 1 hit
SUPFAMiSSF47095 SSF47095, 1 hit
PROSITEiView protein in PROSITE
PS50118 HMG_BOX_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All

A0A2K6RFW7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSSKRPASPY GEADGEVAMV TSRQKVEEEE SDGLPAFHLP LHVSFPNKPH
60 70 80 90 100
SEEFQPVSLL TQETCGHRTP TSQHNTMEVD GNKVMSSFAP HNSSTSPQKA
110 120 130 140 150
EEGGRQSGES LSSTALGTPE RRKGSLADVV DTLKQRKMEE LIKNEPEETP
160 170 180 190 200
SIEKLLSKDW KDKLLAMGSG NFGEIKGTPE SLAEKERQLM GMINQLTSLR
210 220 230 240 250
EQLLAAHDEQ KKLAASQIEK QRQQMELAKQ QQEQIARQQQ QLLQQQHKIN
260 270 280 290 300
LLQQQIQQVQ GQLPPLMIPV FPPDQRTLAA AAQQGFLLPP GFSYKAGCSD
310 320 330 340 350
PYPVQLIPTT MAAAAAATPG LGPLQLQDEV AQPLNLSAKP KTSDGKSPTS
360 370 380 390 400
PTSPHMPALR INSGAGPLKA SVPAALASPS ARVSTIGYLN DHDAVTKAIQ
410 420 430 440 450
EARQMKEQLR REQQVLDGKV AVVNSLGLNN CRTEKEKTTL ESLTQQLAVK
460 470 480 490 500
QNEEGKFSHA MMDFNLSGDS DGSAGVSESR IYRESRGRGS NEPHIKRPMN
510 520 530 540 550
AFMVWAKDER RKILQAFPDM HNSNISKILG SRWKAMTNLE KQPYYEEQAR
560 570 580 590 600
LSKQHLEKYP DYKYKPRPKR TCLVDGKKLR IGEYKAIMRN RRQEMRQYFN
610 620 630 640 650
VGQQAQIPIA TAGVVYPGAI AMAGMPSPHL PSEHSSVSSS PEPGMPVIQS
660 670 680 690 700
TYGVKGEEPH IKEEIQAEDI NGEIYDEYDE EEDDPDVDYG SDSENHIAGQ

AN
Length:702
Mass (Da):77,686
Last modified:March 28, 2018 - v1
Checksum:i6EF9DE6B31DF69D6
GO

Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2K6RFU3A0A2K6RFU3_RHIRO
Uncharacterized protein
750Annotation score:
A0A2K6RFU8A0A2K6RFU8_RHIRO
Uncharacterized protein
377Annotation score:
A0A2K6RFN9A0A2K6RFN9_RHIRO
Uncharacterized protein
734Annotation score:
A0A2K6RFS7A0A2K6RFS7_RHIRO
Uncharacterized protein
386Annotation score:
A0A2K6RFQ0A0A2K6RFQ0_RHIRO
Uncharacterized protein
509Annotation score:

Genome annotation databases

EnsembliENSRROT00000064378; ENSRROP00000039890; ENSRROG00000043207

Similar proteinsi

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRROT00000064378; ENSRROP00000039890; ENSRROG00000043207

Phylogenomic databases

GeneTreeiENSGT00760000119274

Family and domain databases

Gene3Di1.10.30.10, 1 hit
InterProiView protein in InterPro
IPR009071 HMG_box_dom
IPR036910 HMG_box_dom_sf
PfamiView protein in Pfam
PF00505 HMG_box, 1 hit
SMARTiView protein in SMART
SM00398 HMG, 1 hit
SUPFAMiSSF47095 SSF47095, 1 hit
PROSITEiView protein in PROSITE
PS50118 HMG_BOX_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2K6RFW7_RHIRO
AccessioniPrimary (citable) accession number: A0A2K6RFW7
Entry historyiIntegrated into UniProtKB/TrEMBL: March 28, 2018
Last sequence update: March 28, 2018
Last modified: May 23, 2018
This is version 3 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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