UniProtKB - A0A2K6R0F9 (A0A2K6R0F9_RHIRO)
Protein
Sodium channel protein
Gene
SCN2A
Organism
Rhinopithecus roxellana (Golden snub-nosed monkey) (Pygathrix roxellana)
Status
Functioni
Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na+ ions may pass in accordance with their electrochemical gradient.UniRule annotation
Caution
Lacks conserved residue(s) required for the propagation of feature annotation.UniRule annotation
GO - Molecular functioni
- voltage-gated ion channel activity Source: UniProtKB-KW
- voltage-gated sodium channel activity Source: Ensembl
GO - Biological processi
- intrinsic apoptotic signaling pathway in response to osmotic stress Source: Ensembl
- memory Source: Ensembl
- nervous system development Source: Ensembl
- neuron apoptotic process Source: Ensembl
- regulation of ion transmembrane transport Source: UniProtKB-KW
Keywordsi
Molecular function | Ion channel, Sodium channelUniRule annotationARBA annotation, Voltage-gated channelUniRule annotation |
Biological process | Ion transport, Sodium transport, Transport |
Ligand | Sodium |
Names & Taxonomyi
Protein namesi | Recommended name: Sodium channel proteinUniRule annotation |
Gene namesi | Name:SCN2AImported |
Organismi | Rhinopithecus roxellana (Golden snub-nosed monkey) (Pygathrix roxellana)Imported |
Taxonomic identifieri | 61622 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Cercopithecidae › Colobinae › Rhinopithecus |
Proteomesi |
|
Subcellular locationi
Plasma membrane
- Cell membrane UniRule annotationARBA annotation; Multi-pass membrane protein UniRule annotationARBA annotation
Other locations
- Membrane ARBA annotation; Multi-pass membrane protein ARBA annotation
Plasma Membrane
- integral component of presynaptic membrane Source: Ensembl
- T-tubule Source: Ensembl
- voltage-gated sodium channel complex Source: UniProtKB-UniRule
Other locations
- glutamatergic synapse Source: Ensembl
- intercalated disc Source: Ensembl
- paranode region of axon Source: Ensembl
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 125 – 148 | HelicalUniRule annotationAdd BLAST | 24 | |
Transmembranei | 251 – 271 | HelicalUniRule annotationAdd BLAST | 21 | |
Transmembranei | 401 – 428 | HelicalUniRule annotationAdd BLAST | 28 | |
Transmembranei | 751 – 775 | HelicalUniRule annotationAdd BLAST | 25 | |
Transmembranei | 787 – 808 | HelicalUniRule annotationAdd BLAST | 22 | |
Transmembranei | 870 – 898 | HelicalUniRule annotationAdd BLAST | 29 | |
Transmembranei | 960 – 983 | HelicalUniRule annotationAdd BLAST | 24 | |
Transmembranei | 1209 – 1227 | HelicalUniRule annotationAdd BLAST | 19 | |
Transmembranei | 1248 – 1270 | HelicalUniRule annotationAdd BLAST | 23 | |
Transmembranei | 1276 – 1296 | HelicalUniRule annotationAdd BLAST | 21 | |
Transmembranei | 1325 – 1351 | HelicalUniRule annotationAdd BLAST | 27 | |
Transmembranei | 1449 – 1473 | HelicalUniRule annotationAdd BLAST | 25 | |
Transmembranei | 1532 – 1550 | HelicalUniRule annotationAdd BLAST | 19 | |
Transmembranei | 1562 – 1580 | HelicalUniRule annotationAdd BLAST | 19 | |
Transmembranei | 1587 – 1612 | HelicalUniRule annotationAdd BLAST | 26 | |
Transmembranei | 1649 – 1677 | HelicalUniRule annotationAdd BLAST | 29 | |
Transmembranei | 1753 – 1776 | HelicalUniRule annotationAdd BLAST | 24 |
Keywords - Cellular componenti
Cell membraneARBA annotation, MembranePTM / Processingi
Keywords - PTMi
Disulfide bondARBA annotation, PhosphoproteinARBA annotation, Ubl conjugationARBA annotationFamily & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 128 – 435 | Ion_transInterPro annotationAdd BLAST | 308 | |
Domaini | 508 – 709 | Na_trans_cytoplInterPro annotationAdd BLAST | 202 | |
Domaini | 760 – 988 | Ion_transInterPro annotationAdd BLAST | 229 | |
Domaini | 997 – 1203 | Na_trans_assocInterPro annotationAdd BLAST | 207 | |
Domaini | 1207 – 1481 | Ion_transInterPro annotationAdd BLAST | 275 | |
Domaini | 1531 – 1786 | Ion_transInterPro annotationAdd BLAST | 256 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 28 – 61 | DisorderedSequence analysisAdd BLAST | 34 | |
Regioni | 494 – 529 | DisorderedSequence analysisAdd BLAST | 36 | |
Regioni | 590 – 610 | DisorderedSequence analysisAdd BLAST | 21 | |
Regioni | 1120 – 1165 | DisorderedSequence analysisAdd BLAST | 46 | |
Regioni | 1935 – 2005 | DisorderedSequence analysisAdd BLAST | 71 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 425 – 470 | Sequence analysisAdd BLAST | 46 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 28 – 53 | PolyampholyteSequence analysisAdd BLAST | 26 | |
Compositional biasi | 510 – 529 | PolyampholyteSequence analysisAdd BLAST | 20 | |
Compositional biasi | 1935 – 1959 | PolyampholyteSequence analysisAdd BLAST | 25 | |
Compositional biasi | 1960 – 1977 | PolarSequence analysisAdd BLAST | 18 | |
Compositional biasi | 1978 – 2005 | PolyampholyteSequence analysisAdd BLAST | 28 |
Sequence similaritiesi
Keywords - Domaini
Coiled coilSequence analysis, Transmembrane, Transmembrane helixUniRule annotationARBA annotationPhylogenomic databases
GeneTreei | ENSGT00940000154224 |
OMAi | YILNPFN |
OrthoDBi | 56920at2759 |
Family and domain databases
Gene3Di | 1.20.120.350, 4 hits |
InterProi | View protein in InterPro IPR005821, Ion_trans_dom IPR000048, IQ_motif_EF-hand-BS IPR001696, Na_channel_asu IPR010526, Na_trans_assoc IPR024583, Na_trans_cytopl IPR043203, VGCC_Ca_Na IPR027359, Volt_channel_dom_sf |
PANTHERi | PTHR10037, PTHR10037, 1 hit |
Pfami | View protein in Pfam PF00520, Ion_trans, 4 hits PF06512, Na_trans_assoc, 1 hit PF11933, Na_trans_cytopl, 1 hit |
PRINTSi | PR00170, NACHANNEL |
SMARTi | View protein in SMART SM00015, IQ, 1 hit |
PROSITEi | View protein in PROSITE PS50096, IQ, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 7 potential isoforms that are computationally mapped.Show allAlign All
A0A2K6R0F9-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAQSVLVPPG PDSFRFFTRE SLAAIEQRIA EEKAKRPKQE RKDEDDENGP
60 70 80 90 100
KPNSDLEAGK SLPFIYGDIP PEMVSVPLED LDPYYINKKT FIVLNKGKAI
110 120 130 140 150
SRFSATPALY ILTPFNPIRK LAIKILVHSL FNMLIMCTIL TNCVFMTMSN
160 170 180 190 200
PPDWTKNVEY TFTGIYTFES LIKILARGFC LEDFTFLRDP WNWLDFTVIT
210 220 230 240 250
FAYVTEFVDL GNVSALRTFR VLRALKTISV IPGLKTIVGA LIQSVKKLSD
260 270 280 290 300
VMILTVFCLS VFALIGLQLF MGNLRNKCLQ WPPDNSSFEI NITSFFNNSL
310 320 330 340 350
DGNGTTFNRT VSMFNWDEYI EDKSHFYFLE GQNDALLCGN SSDAGQCPEG
360 370 380 390 400
YICVKAGRNP NYGYTSFDTF SWAFLSLFRL MTQDFWENLY QLTLRAAGKT
410 420 430 440 450
YMIFFVLVIF LGSFYLINLI LAVVAMAYEE QNQATLEEAE QKEAEFQQML
460 470 480 490 500
EQLKKQQEEA QAAAAAASAE SRDFSGAGGI GVFSESSSVA SKLSSKSEKE
510 520 530 540 550
LKNRRKKKKQ KEQSGEEEKN DRVRKSESED SIRRKGFRFS LEGSRLTYEK
560 570 580 590 600
RFSSPHQSLL SIRGSLFSPR RNSRASLFSF RGRAKDIGSE NDFADDEHST
610 620 630 640 650
FEDNDSRRDS LFVPHRHGER RHSNVSQASR ASRVLPILPM NGKMHSAVDC
660 670 680 690 700
NGVVSLVGGP STLTSAGQLL PEGTTTETEI RKRRSSSYHV SMDLLEDPTS
710 720 730 740 750
RQRAMSIASI LTNTMEELEE SRQKCPPCWY KFANMCLIWD CCKPWLKVKH
760 770 780 790 800
LVNLVVMDPF VDLAITICIV LNTLFMAMEH YPMTEQFSSV LSVGNLVFTG
810 820 830 840 850
IFTAEMFLKI IAMDPYYYFQ EGWNIFDGFI VSLSLMELGL ANVEGLSVLR
860 870 880 890 900
SFRLLRVFKL AKSWPTLNML IKIIGNSVGA LGNLTLVLAI IVFIFAVVGM
910 920 930 940 950
QLFGKSYKEC VCKISNDCEL PRWHMHDFFH SFLIVFRVLC GEWIETMWDC
960 970 980 990 1000
MEVAGQTMCL TVFMMVMVIG NLVVLNLFLA LLLSSFSSDN LAATDDDNEM
1010 1020 1030 1040 1050
NNLQIAVGRM QKGIDFVKRK IREFIQKAFV RKQKALDEIK PLEDLNNKKD
1060 1070 1080 1090 1100
SCISNHTTIE IGKDLNYLKD GNGTTSGIGS SVEKYVVDES DYMSFINNPS
1110 1120 1130 1140 1150
LTVTVPIAVG ESDFENLNTE EFSSESDMEE SKEKLNATSS SEGSTVDIGA
1160 1170 1180 1190 1200
PAEGEQPEVE PEESLEPEAC FTEDCVRKFK CCQISIEEGK GKLWWNLRKT
1210 1220 1230 1240 1250
CYKIVEHNWF ETFIVFMILL SSGALAFEDI YIEQRKTIKT MLEYADKVFT
1260 1270 1280 1290 1300
YIFILEMLLK WVAYGFQVYF TNAWCWLDFL IVDVSLVSLT ANALGYSELG
1310 1320 1330 1340 1350
AIKSLRTLRA LRPLRALSRF EGMRVVVNAL LGAIPSIMNV LLVCLIFWLI
1360 1370 1380 1390 1400
FSIMGVNLFA GKFYHCINYT TGEMFDVSVV NNYSECKALI ESNQTARWKN
1410 1420 1430 1440 1450
VKVNFDNVGL GYLSLLQVAT FKGWMDIMYA AVDSRNVELQ PKYEDNLYMY
1460 1470 1480 1490 1500
LYFVIFIIFG SFFTLNLFIG VIIDNFNQQK KKFGGQDIFM TEEQKKYYNA
1510 1520 1530 1540 1550
MKKLGSKKPQ KPIPRPANKF QGMVFDFVTK QVFDISIMIL ICLNMVTMMV
1560 1570 1580 1590 1600
ETDDQSQEMT NILYWINLVF IVLFTGECVL KLISLRYYYF TIGWNIFDFV
1610 1620 1630 1640 1650
VVILSIVGMF LAELIEKYFV SPTLFRVIRL ARIGRILRLI KGAKGIRTLL
1660 1670 1680 1690 1700
FALMMSLPAL FNIGLLLFLV MFIYAIFGMS NFAYVKREVG IDDMFNFETF
1710 1720 1730 1740 1750
GNSMICLFQI TTSAGWDGLL APILNSGPPD CDPEKDHPGS SVKGDCGNPS
1760 1770 1780 1790 1800
VGIFFFVSYI IISFLVVVNM YIAVILENFS VATEESAEPL SEDDFEMFYE
1810 1820 1830 1840 1850
VWEKFDPDAT QFIEFAKLSD FADALDPPLL IAKPNKVQLI AMDLPMVSGD
1860 1870 1880 1890 1900
RIHCLDILFA FTKRVLGESG EMDALRIQME ERFMASNPSK ISYEPITTTL
1910 1920 1930 1940 1950
KRKQEEVSAI IIQRAYRRYL LKQKVKKVSS IYKKDKGKEC DGTPIKEDTL
1960 1970 1980 1990 2000
IDKLNENSTP EKTDMTPSTT SPPSYDSVTK PEKEKFEKDK SEKEDKGKDI
RESKK
Computationally mapped potential isoform sequencesi
There are 7 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketA0A2K6R0B5 | A0A2K6R0B5_RHIRO | Sodium channel protein | SCN2A | 2,005 | Annotation score: | ||
A0A2K6R0E3 | A0A2K6R0E3_RHIRO | Sodium channel protein | SCN2A | 1,975 | Annotation score: | ||
A0A2K6R0E4 | A0A2K6R0E4_RHIRO | Sodium channel protein | SCN2A | 1,971 | Annotation score: | ||
A0A2K6R0C8 | A0A2K6R0C8_RHIRO | Sodium channel protein | SCN2A | 1,837 | Annotation score: | ||
A0A2K6R0I2 | A0A2K6R0I2_RHIRO | Sodium channel protein | SCN2A | 1,920 | Annotation score: | ||
A0A2K6R0F7 | A0A2K6R0F7_RHIRO | Uncharacterized protein | SCN2A | 700 | Annotation score: | ||
A0A2K6R0J5 | A0A2K6R0J5_RHIRO | Uncharacterized protein | SCN2A | 701 | Annotation score: |
Sequence databases
RefSeqi | XP_010363608.1, XM_010365306.1 XP_010363609.1, XM_010365307.1 |
Genome annotation databases
Ensembli | ENSRROT00000058935; ENSRROP00000034489; ENSRROG00000040513 |
GeneIDi | 104663916 |
KEGGi | rro:104663916 |
Similar proteinsi
Cross-referencesi
Sequence databases
RefSeqi | XP_010363608.1, XM_010365306.1 XP_010363609.1, XM_010365307.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Genome annotation databases
Ensembli | ENSRROT00000058935; ENSRROP00000034489; ENSRROG00000040513 |
GeneIDi | 104663916 |
KEGGi | rro:104663916 |
Organism-specific databases
CTDi | 6326 |
Phylogenomic databases
GeneTreei | ENSGT00940000154224 |
OMAi | YILNPFN |
OrthoDBi | 56920at2759 |
Family and domain databases
Gene3Di | 1.20.120.350, 4 hits |
InterProi | View protein in InterPro IPR005821, Ion_trans_dom IPR000048, IQ_motif_EF-hand-BS IPR001696, Na_channel_asu IPR010526, Na_trans_assoc IPR024583, Na_trans_cytopl IPR043203, VGCC_Ca_Na IPR027359, Volt_channel_dom_sf |
PANTHERi | PTHR10037, PTHR10037, 1 hit |
Pfami | View protein in Pfam PF00520, Ion_trans, 4 hits PF06512, Na_trans_assoc, 1 hit PF11933, Na_trans_cytopl, 1 hit |
PRINTSi | PR00170, NACHANNEL |
SMARTi | View protein in SMART SM00015, IQ, 1 hit |
PROSITEi | View protein in PROSITE PS50096, IQ, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | A0A2K6R0F9_RHIRO | |
Accessioni | A0A2K6R0F9Primary (citable) accession number: A0A2K6R0F9 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | March 28, 2018 |
Last sequence update: | March 28, 2018 | |
Last modified: | February 10, 2021 | |
This is version 20 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |