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Protein
Submitted name:

Uncharacterized protein

Gene

SLC24A1

Organism
Rhinopithecus roxellana (Golden snub-nosed monkey) (Pygathrix roxellana)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:SLC24A1Imported
OrganismiRhinopithecus roxellana (Golden snub-nosed monkey) (Pygathrix roxellana)Imported
Taxonomic identifieri61622 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniCercopithecidaeColobinaeRhinopithecus
Proteomesi
  • UP000233200 Componenti: Whole Genome Shotgun Assembly

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei21 – 41HelicalSequence analysisAdd BLAST21
Transmembranei454 – 473HelicalSequence analysisAdd BLAST20
Transmembranei494 – 518HelicalSequence analysisAdd BLAST25
Transmembranei524 – 546HelicalSequence analysisAdd BLAST23
Transmembranei558 – 576HelicalSequence analysisAdd BLAST19
Transmembranei582 – 599HelicalSequence analysisAdd BLAST18
Transmembranei904 – 920HelicalSequence analysisAdd BLAST17
Transmembranei940 – 963HelicalSequence analysisAdd BLAST24
Transmembranei975 – 996HelicalSequence analysisAdd BLAST22
Transmembranei1002 – 1022HelicalSequence analysisAdd BLAST21
Transmembranei1034 – 1053HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini459 – 599Na_Ca_exInterPro annotationAdd BLAST141
Domaini925 – 1051Na_Ca_exInterPro annotationAdd BLAST127

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili682 – 702Sequence analysisAdd BLAST21
Coiled coili856 – 890Sequence analysisAdd BLAST35

Sequence similaritiesi

Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. [View classification]SAAS annotation

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00760000119209

Family and domain databases

InterProiView protein in InterPro
IPR004481 K/Na/Ca-exchanger
IPR004837 NaCa_Exmemb
IPR004817 SLC24A1
PANTHERiPTHR10846 PTHR10846, 2 hits
PfamiView protein in Pfam
PF01699 Na_Ca_ex, 2 hits
TIGRFAMsiTIGR00927 2A1904, 1 hit
TIGR00367 TIGR00367, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.Show allAlign All

A0A2K6QDY0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGKLIRMGPQ DRRLLRTKRL HWSRLLFLLG MLIIGSTYQH LRRPRGLSSL
60 70 80 90 100
WAAVSSHQPV KLASRDLASE EMMMVSSNPP KPSSEMGGEM LVPQASVGSD
110 120 130 140 150
EATLSMTVEN IPDIPKRTAK MIPTTTKNNY SPTAAGTERR KEDTPTSRRT
160 170 180 190 200
LTYYTSTSSR QIVKKYTPTP TGEMKSYSPT QVREKVKYTP SPRGRRVGTY
210 220 230 240 250
ASSTFMTMET SHATTPRTTV KDSDITTTYK ILETNSLKRI MEETTPTTLK
260 270 280 290 300
GMVDSTPTFL THEVETNVLT SPRSIVEKNN LSPPRRVESN SSAHPWGLVG
310 320 330 340 350
KNNLKTPQGT VLTHTPATSE GQVTISTMTG SNPSETKAFT AAWSVRNPSP
360 370 380 390 400
RTSVSAIETA PATVWRLAKK PYTAPSTSTT PTVRAKPTTQ VHHCVVVKPT
410 420 430 440 450
PAMPTTPSPS LTTALLPEEL SPSPSVLPPI LPDLPPKGEY PPDLFSVEER
460 470 480 490 500
RQGWVVLHIF GMMYVFVALA IVCDEYFVPA LGVITDKLQI SEDVAGATFM
510 520 530 540 550
AAGGSAPELF TSLIGVFISH SNVGIGTIVG SAVFNILFVI GTCSLFSREI
560 570 580 590 600
LNLTWWPLFR DVSFYILDLI MLILFFLDSL IAWWESLLLL LAYAFYVFTM
610 620 630 640 650
KWNKQIEAWV KEQLSRRPAA KVMALGDLSK PGDGAIAVDE LQDNKKLKLP
660 670 680 690 700
SLLTRGSSST SLHNSTIRST IYQLMLHSLD PLREVRLAKE KEEESLNQEA
710 720 730 740 750
RAQPLAKSES KPEEEEPAKL PAVTVTPAPA PDIKGDQKEN PGGQEDVAEA
760 770 780 790 800
ESTGEMTGEE GETAGEGETE EKSGGETQPE GEGETGTQGK GEEHEKENEA
810 820 830 840 850
EGKGDNEGEG EGEIHAEDGE MKGIEGETES QELSAENHGE AKIDEKGVED
860 870 880 890 900
GGGSDGGDNE EEEEEEEEEE EEEEEEEEEE EEEEEEGNEE PLSLDWPETR
910 920 930 940 950
QKQAIYLFLL PIVFPLWLTV PDVRRQVGET IGISEEIMGL TILAAGTSIP
960 970 980 990 1000
DLITSVIVAR KGLGDMAVSS SVGSNIFDIT VGLPVPWLLF CLINGLQPVP
1010 1020 1030 1040 1050
VSSNGLFCAI VLLFLMLLFV ISSIASCKWR MNKILGFTMF LLYFVFLIIS
1060
VMLEDRIISC PVSV
Length:1,064
Mass (Da):116,762
Last modified:March 28, 2018 - v1
Checksum:i2C5982FBED806EF1
GO

Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2K6QDX4A0A2K6QDX4_RHIRO
Uncharacterized protein
SLC24A1
1,094Annotation score:
A0A2K6QDY1A0A2K6QDY1_RHIRO
Uncharacterized protein
SLC24A1
1,076Annotation score:
A0A2K6QDY4A0A2K6QDY4_RHIRO
Uncharacterized protein
SLC24A1
1,007Annotation score:
A0A2K6QDZ1A0A2K6QDZ1_RHIRO
Uncharacterized protein
SLC24A1
980Annotation score:

Sequence databases

RefSeqiXP_010353819.1, XM_010355517.1

Genome annotation databases

EnsembliENSRROT00000051268; ENSRROP00000026987; ENSRROG00000037268
GeneIDi104655954

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_010353819.1, XM_010355517.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRROT00000051268; ENSRROP00000026987; ENSRROG00000037268
GeneIDi104655954

Organism-specific databases

CTDi9187

Phylogenomic databases

GeneTreeiENSGT00760000119209

Family and domain databases

InterProiView protein in InterPro
IPR004481 K/Na/Ca-exchanger
IPR004837 NaCa_Exmemb
IPR004817 SLC24A1
PANTHERiPTHR10846 PTHR10846, 2 hits
PfamiView protein in Pfam
PF01699 Na_Ca_ex, 2 hits
TIGRFAMsiTIGR00927 2A1904, 1 hit
TIGR00367 TIGR00367, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2K6QDY0_RHIRO
AccessioniPrimary (citable) accession number: A0A2K6QDY0
Entry historyiIntegrated into UniProtKB/TrEMBL: March 28, 2018
Last sequence update: March 28, 2018
Last modified: October 10, 2018
This is version 6 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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