Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Zinc finger and SCAN domain containing 18

Gene

ZSCAN18

Organism
Rhinopithecus roxellana (Golden snub-nosed monkey) (Pygathrix roxellana)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Biological processTranscription, Transcription regulationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger and SCAN domain containing 18Imported
Gene namesi
Name:ZSCAN18Imported
OrganismiRhinopithecus roxellana (Golden snub-nosed monkey) (Pygathrix roxellana)Imported
Taxonomic identifieri61622 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniCercopithecidaeColobinaeRhinopithecus
Proteomesi
  • UP000233200 Componenti: Whole Genome Shotgun Assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini49 – 127SCAN boxInterPro annotationAdd BLAST79
Domaini453 – 480C2H2-typeInterPro annotationAdd BLAST28
Domaini481 – 508C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

RepeatSAAS annotation, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00910000144000
KOiK09230

Family and domain databases

CDDicd07936 SCAN, 1 hit
Gene3Di1.10.4020.10, 1 hit
InterProiView protein in InterPro
IPR003309 SCAN_dom
IPR038269 SCAN_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF02023 SCAN, 1 hit
SMARTiView protein in SMART
SM00431 SCAN, 1 hit
SM00355 ZnF_C2H2, 2 hits
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS50804 SCAN_BOX, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 2 hits
PS50157 ZINC_FINGER_C2H2_2, 2 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

A0A2K6P121-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLPLEKAFAS PRSSPTPLDL PTPGSAAGVQ QEEPETIPER TPADLEFSRL
60 70 80 90 100
RFREFVYQEA AGPHQTLARL HELCRQWLMP EARSKEQMLE LLVLEQFLGI
110 120 130 140 150
LPDKVRPWVV AQYPESCKKA ASLVEGLADV LEEPGMLLGS PAGSSSILSD
160 170 180 190 200
GVYERHMDPL LLPGELESAS QAPGAGEIPA PSETPWLSPD SLFLEQRRVR
210 220 230 240 250
EARTEEASPA NTEQKLKSFP EEPQHLEEWG HLDPAEENLK SYRKLLLWGY
260 270 280 290 300
QLSQPDAASR LDTEELRLVE RDPQGSGVPE GGRQQETAGC ACEEAAPARV
310 320 330 340 350
LPELPTEVPP GDALADPPSG TTEEEVEQPG KAPDPQDPQG PQDPQDPQDP
360 370 380 390 400
QDPQEPQDPQ DPQDPQDPQD AESGSSSESQ RQSVIQQPAP DRGAARLGTK
410 420 430 440 450
RPHPEDGDGQ SLEGVSGDGQ SLEGVSGAGH STGLAAGQGP GADEPGLSRG
460 470 480 490 500
KPYACGECGE AFAWLSHLME HHSSHGGRKR YACQGCWKTF HFSLALAEHQ
510 520 530 540 550
KTHEKEKSYA LGGARGPQPS TREAQAGARA GGPPESGEGE ALPAPPEAQR
Length:550
Mass (Da):59,220
Last modified:March 28, 2018 - v1
Checksum:i74CA5D48FFEC148A
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2K6P131A0A2K6P131_RHIRO
Uncharacterized protein
ZSCAN18
553Annotation score:

Sequence databases

RefSeqiXP_010385269.1, XM_010386967.1
XP_010385270.1, XM_010386968.1
XP_010385271.1, XM_010386969.1

Genome annotation databases

EnsembliENSRROT00000034318; ENSRROP00000010221; ENSRROG00000029525
ENSRROT00000034320; ENSRROP00000010223; ENSRROG00000029525
GeneIDi104680883
KEGGirro:104680883

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_010385269.1, XM_010386967.1
XP_010385270.1, XM_010386968.1
XP_010385271.1, XM_010386969.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRROT00000034318; ENSRROP00000010221; ENSRROG00000029525
ENSRROT00000034320; ENSRROP00000010223; ENSRROG00000029525
GeneIDi104680883
KEGGirro:104680883

Organism-specific databases

CTDi65982

Phylogenomic databases

GeneTreeiENSGT00910000144000
KOiK09230

Family and domain databases

CDDicd07936 SCAN, 1 hit
Gene3Di1.10.4020.10, 1 hit
InterProiView protein in InterPro
IPR003309 SCAN_dom
IPR038269 SCAN_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF02023 SCAN, 1 hit
SMARTiView protein in SMART
SM00431 SCAN, 1 hit
SM00355 ZnF_C2H2, 2 hits
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS50804 SCAN_BOX, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 2 hits
PS50157 ZINC_FINGER_C2H2_2, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2K6P121_RHIRO
AccessioniPrimary (citable) accession number: A0A2K6P121
Entry historyiIntegrated into UniProtKB/TrEMBL: March 28, 2018
Last sequence update: March 28, 2018
Last modified: November 7, 2018
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again