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Protein
Submitted name:

Uncharacterized protein

Gene

SYNM

Organism
Propithecus coquereli (Coquerel's sifaka) (Propithecus verreauxi coquereli)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:SYNMImported
OrganismiPropithecus coquereli (Coquerel's sifaka) (Propithecus verreauxi coquereli)Imported
Taxonomic identifieri379532 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesStrepsirrhiniLemuriformesIndriidaePropithecus
Proteomesi
  • UP000233160 Componenti: Whole Genome Shotgun Assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Intermediate filamentPROSITE-ProRule annotationSAAS annotation

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 322IF rodInterPro annotationAdd BLAST312

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili15 – 49Sequence analysisAdd BLAST35
Coiled coili64 – 108Sequence analysisAdd BLAST45
Coiled coili120 – 140Sequence analysisAdd BLAST21
Coiled coili192 – 226Sequence analysisAdd BLAST35
Coiled coili230 – 286Sequence analysisAdd BLAST57

Sequence similaritiesi

Belongs to the intermediate filament family.PROSITE-ProRule annotationSAAS annotation

Keywords - Domaini

Coiled coilPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00730000110953

Family and domain databases

InterProiView protein in InterPro
IPR001664 IF
IPR018039 IF_conserved
IPR039008 IF_rod_dom
IPR030634 SYNM
PANTHERiPTHR23239 PTHR23239, 1 hit
PTHR23239:SF194 PTHR23239:SF194, 1 hit
PfamiView protein in Pfam
PF00038 Filament, 1 hit
SMARTiView protein in SMART
SM01391 Filament, 1 hit
PROSITEiView protein in PROSITE
PS00226 IF_ROD_1, 1 hit
PS51842 IF_ROD_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

A0A2K6GE76-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLSWRLQTGP EKAELQELNA RLYDYVCRVR ELERENLLLE EELRGRRGQE
60 70 80 90 100
GLWAEWQARF ADEARGLREQ LDELSWATAQ AESERDAFRR ELRELQRLDA
110 120 130 140 150
EARAARGRLD AELGAQRREL QEELSARAAL EALLGRLQAE RHGLDAAHER
160 170 180 190 200
EVRELRARAA GLTMHYRARA AGPAAPPPRL REVQDSYALL VAESWRETVQ
210 220 230 240 250
LYEDEVRELE EALRRGQESR LQVEEETRLC AQEAEALRRQ ALELEQLRAR
260 270 280 290 300
LEDELLRMRE EYGLQAEERQ RVIDCLEDEK ENLTLAMADR LRDYQELLQV
310 320 330 340 350
KTSLSREVAT YRALLEGESN PEILIWTEHV ENMPPEFRTK SYQYTGSALQ
360 370 380 390 400
RENERNLLSR QKAPLAGLNR SSAVYSNRSG YAASQTTTSV GSAARRGLLG
410 420 430 440 450
LGYPSPATGQ QENSYGKTVN SQTSFRTFSP TYGLLRNTEA QVKTFSDRPK
460 470 480 490 500
AEGARAAPAY SAREPTVVQE SHRDSVAAGA PRSTRSSERT VTLGKKTEVS
510 520 530 540 550
TTREQEGNRP ATIKAKQEEK LFDSKEKASE ERNLRWEELT KLDKEARERE
560 570 580 590 600
SRHMRERARG KESLKEKSVS EREVPVSLEV SQDSRPEASP KGPQTPVKKE
610 620 630 640 650
AGDATGREAE TREARFRLGD TASSPQGDST TETIAENIVT SILKQFTQSP
660 670 680 690 700
DAEASANAFP DTKVTYMARK ELPGEKKTKT EIVVESKLTE DVDISNEAGL
710 720 730 740 750
DYLLSKDMKE VGLKGKSAER MIGDIINLGL KGKEGRAKVV NVEIIEEPVS
760 770 780 790 800
YVGGDKAEAF SVPFEVEEVD DVSPGSKGLV EEEESYGETD VTFSVNQSQR
810 820 830 840 850
TKQPQENITH VEEVTEAGDS EGEQSYFVST PDEHPGDHDR DDGSVYGQIH
860 870 880 890 900
IEEESTIRYS WQDEIVQGTW RRRKRDDEVG EQVVKPLDVP APSPEGEVGS
910 920 930 940 950
THWKEQTRSG EFHAEPIVIE KEIKIPHEFH TSIKGMSSKE PRHQLAEVIG
960 970 980 990 1000
QLEETLPERM KEELSALTRE GLDESGGVSV DVKKVQTSGG GSVSLVAEVS
1010 1020 1030 1040 1050
LSETVDADQL DLEQLSRDEA GEIEKTVESV VRESLARRHG SAPGSPDGED
1060 1070 1080 1090 1100
GAEAPGVGLR FKRWATRELY SPSAEREEAG EASRGRERLT SPGPVSATLE
1110 1120 1130 1140 1150
VSSPGAVAQS HVLEDVSRSV RHVKLGPTEI WRTERVSQGG PTAGVAEMDV
1160 1170 1180 1190 1200
SHVEAIPSWT REAGTEAEAH GVSDRGGWSH ADSRNDQAAG GSLKAPAGAG
1210 1220 1230 1240 1250
RQAHGEQGKE QAEFDKTVQL QRMVDQRSVI SDEKKVALLY LDNEEEENDG

HWF
Length:1,253
Mass (Da):139,775
Last modified:March 28, 2018 - v1
Checksum:i0C4B5904DFC5199D
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2K6GE67A0A2K6GE67_PROCO
Uncharacterized protein
SYNM
340Annotation score:

Sequence databases

RefSeqiXP_012499249.1, XM_012643795.1

Genome annotation databases

EnsembliENSPCOT00000035207; ENSPCOP00000024525; ENSPCOG00000024463
GeneIDi105809898

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_012499249.1, XM_012643795.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSPCOT00000035207; ENSPCOP00000024525; ENSPCOG00000024463
GeneIDi105809898

Organism-specific databases

CTDi23336

Phylogenomic databases

GeneTreeiENSGT00730000110953

Family and domain databases

InterProiView protein in InterPro
IPR001664 IF
IPR018039 IF_conserved
IPR039008 IF_rod_dom
IPR030634 SYNM
PANTHERiPTHR23239 PTHR23239, 1 hit
PTHR23239:SF194 PTHR23239:SF194, 1 hit
PfamiView protein in Pfam
PF00038 Filament, 1 hit
SMARTiView protein in SMART
SM01391 Filament, 1 hit
PROSITEiView protein in PROSITE
PS00226 IF_ROD_1, 1 hit
PS51842 IF_ROD_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2K6GE76_PROCO
AccessioniPrimary (citable) accession number: A0A2K6GE76
Entry historyiIntegrated into UniProtKB/TrEMBL: March 28, 2018
Last sequence update: March 28, 2018
Last modified: October 10, 2018
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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