Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Synemin

Gene

SYNM

Organism
Macaca nemestrina (Pig-tailed macaque)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
SyneminImported
Gene namesi
Name:SYNMImported
OrganismiMacaca nemestrina (Pig-tailed macaque)Imported
Taxonomic identifieri9545 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniCercopithecidaeCercopithecinaeMacaca
Proteomesi
  • UP000233120 Componenti: Whole Genome Shotgun Assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Intermediate filamentPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 322IF rodInterPro annotationAdd BLAST312

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili15 – 49Sequence analysisAdd BLAST35
Coiled coili78 – 108Sequence analysisAdd BLAST31
Coiled coili120 – 140Sequence analysisAdd BLAST21
Coiled coili192 – 226Sequence analysisAdd BLAST35
Coiled coili234 – 268Sequence analysisAdd BLAST35

Sequence similaritiesi

Belongs to the intermediate filament family.PROSITE-ProRule annotationSAAS annotation

Keywords - Domaini

Coiled coilPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00730000110953

Family and domain databases

InterProiView protein in InterPro
IPR001664 IF
IPR018039 IF_conserved
IPR039008 IF_rod_dom
IPR030634 SYNM
PANTHERiPTHR23239 PTHR23239, 1 hit
PTHR23239:SF194 PTHR23239:SF194, 1 hit
PfamiView protein in Pfam
PF00038 Filament, 1 hit
SMARTiView protein in SMART
SM01391 Filament, 1 hit
PROSITEiView protein in PROSITE
PS00226 IF_ROD_1, 1 hit
PS51842 IF_ROD_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A2K6C5G0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSWRLQTGP EKAELQELNA RLYDYVCRVR ELERENLLLE EELRGRRGRE
60 70 80 90 100
GLWAEGQARC AEEARSLRQQ LDELSWATAL AEGERDALRR ELRELQRLDA
110 120 130 140 150
EERAARGRLD AELGAQQREL QEALGTRAAL EALLGRLQAE RRGLDAAHER
160 170 180 190 200
DVRELRTRAA NLTMHFRARA TGPAAPPPRL REVHDSYALL VAESWRETVQ
210 220 230 240 250
LYEDEVRELE EALRRGEESR LQAEEETRLC AQEAEGLQRE VLGLEQLRAR
260 270 280 290 300
LEEELLRMRE EYGLQAQERQ RVIDCLEDEK ATLTLAMADW LRDYQDLLQV
310 320 330 340 350
KTGLSLEVAT YRALLEGESN PEIVVWTEHI ENMPSEFRNK SYHYTDSLLQ
360 370 380 390 400
RENERNLFSR QKAPLASLNH SSALYSNLSA HRGYQTGTSV GGDARGGFLG
410 420 430 440 450
SGYSSSATTQ QENSYGKTVN SSTNVRTFSP TYGLLRNTEA QVKTFPDRPK
460 470 480 490 500
AGDTREVPVY RAEDSTVARE SYRDRRDNVA AGASESTRSN ERTVILGKKT
510 520 530 540 550
EVKATREQEG NRPETIRTKP EEKMFDSKEK ASEERNLRWE ELTKLDKEAR
560 570 580 590 600
QRESQQMREK AKEKDSPKEK SGQEREIPIS LEVSQDRRAE VSPKGLQMPV
610 620 630 640 650
KDAGGGTGRE AEARALRSTL GTRDAAGSLQ GDSMTETVAE NIVTSILKQF
660 670 680 690 700
TQSPETEASA DSFPDTKVTY VDRKELPGER KTKTEIVVES KLTEDVDISD
710 720 730 740 750
EAGLDYLLSK DIKEVGLKGR SAEQMIGDVI NLGLKGREGR AKVVNVEIVE
760 770 780 790 800
EPVSYVSEGK PEEFSVPFKV EEVEDVSPGS WGLVKEEEGY GESDVTFSVN
810 820 830 840 850
QHQRTKQPQE NTTHVEEVTE AGDSESEQSY FVSTPDEYPG GHDRDDGSVY
860 870 880 890 900
GQIHIEEEST IRYSWQDEIV QGTGRRTQKD GAVGEKVVKP SEIPASSLEG
910 920 930 940 950
DLGSTHWKEQ ARSGEFHAEP TVIEKEIKIP HEFHTSMKGI SSKEPRQQLV
960 970 980 990 1000
EVIGQLEETL PERMREELSA LTREGQGGPG SISVDVKKVQ GAGGGSVTLV
1010 1020 1030 1040 1050
AEVNVSQTVD ADRLDLEELS RDEASEMEKA VESVVRESLS KQRSPAPGSP
1060 1070 1080 1090 1100
DEEDGAEAPA AGARFRRWAT RELYIPAGES EDAGGAPHSS GQHARQGPVS
1110 1120 1130 1140 1150
ATVEVSSPTG FAQSQVLEDV NQAARHIKLG PSEVWRTERM SYEGPAAEVV
1160 1170 1180 1190 1200
EMDVSNVEAI RSRTQEAGDR GVSDHGAWTD ADSRNDRAVG MSFKASAGEG
1210 1220 1230 1240 1250
DQAHGEQGKE QAMFDKKVQL QRMVDQRSVI SDEKKVALLY LDNEEEENDG

HWF
Length:1,253
Mass (Da):140,008
Last modified:March 28, 2018 - v1
Checksum:iFAB72DFB8BCE8F3E
GO

Sequence databases

RefSeqiXP_011735637.1, XM_011737335.1

Genome annotation databases

EnsembliENSMNET00000043117; ENSMNEP00000018879; ENSMNEG00000033330
GeneIDi105479403

Similar proteinsi

Entry informationi

Entry nameiA0A2K6C5G0_MACNE
AccessioniPrimary (citable) accession number: A0A2K6C5G0
Entry historyiIntegrated into UniProtKB/TrEMBL: March 28, 2018
Last sequence update: March 28, 2018
Last modified: June 20, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health