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Protein
Submitted name:

RAR related orphan receptor C

Gene

RORC

Organism
Mandrillus leucophaeus (Drill) (Papio leucophaeus)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi70 – 145Nuclear receptorPROSITE-ProRule annotationAdd BLAST76

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation, ReceptorUniRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
RAR related orphan receptor CImported
Gene namesi
Name:RORCImported
OrganismiMandrillus leucophaeus (Drill) (Papio leucophaeus)Imported
Taxonomic identifieri9568 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniCercopithecidaeCercopithecinaeMandrillus
Proteomesi
  • UP000233140 Componenti: Whole Genome Shotgun Assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini70 – 145Nuclear receptorInterPro annotationAdd BLAST76
Domaini311 – 550NR LBDInterPro annotationAdd BLAST240

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili153 – 173Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the nuclear hormone receptor family.UniRule annotationSAAS annotation

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00870000136388

Family and domain databases

Gene3Di3.30.50.10, 1 hit
InterProiView protein in InterPro
IPR035500 NHR_like_dom_sf
IPR000536 Nucl_hrmn_rcpt_lig-bd
IPR001723 Nuclear_hrmn_rcpt
IPR003079 ROR_rcpt
IPR001628 Znf_hrmn_rcpt
IPR013088 Znf_NHR/GATA
PfamiView protein in Pfam
PF00104 Hormone_recep, 1 hit
PF00105 zf-C4, 1 hit
PRINTSiPR01293 RORNUCRECPTR
PR00398 STRDHORMONER
PR00047 STROIDFINGER
SMARTiView protein in SMART
SM00430 HOLI, 1 hit
SM00399 ZnF_C4, 1 hit
SUPFAMiSSF48508 SSF48508, 1 hit
PROSITEiView protein in PROSITE
PS51843 NR_LBD, 1 hit
PS00031 NUCLEAR_REC_DBD_1, 1 hit
PS51030 NUCLEAR_REC_DBD_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A2K6A2E8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGRPWPHPW SKSGTPSEQD PRATGLVSCE HGGGKFEGQS HQAPGPPGGG
60 70 80 90 100
RTGCLKLLAA KKTHTSQIEV IPCKICGDKS SGIHYGVITC EGCKGFFRRS
110 120 130 140 150
QRCNAAYSCT RQQNCPIDRT SRNRCQHCRL QKCLALGMSR DAVKFGRMSK
160 170 180 190 200
KQRDSLHAEV QKQLQQRQQQ QQEPVVKTPP AGAQGADTLT YTLGLPDGQL
210 220 230 240 250
PLGSSPDLPE ASACPPGLLR ASGSGPSYSN NLAKAGLNGA SCHLEYSPER
260 270 280 290 300
GKAEGRESFY STGSQLTPDR CGLRFEEHRH PGLGELGQGP DSYGSPSFRS
310 320 330 340 350
TPEAPYASLT EIEHLVQSVC KSYRETCQLR LEDLLRQRSN IFSREEVTGY
360 370 380 390 400
QRKSMWEMWE RCAHHLTEAI QYVVEFAKRL SGFMELCQND QIVLLKAGAM
410 420 430 440 450
EVVLVRMCRA YNADNHTVFF EGKYGGMELF RALGCSELIS SIFDFSHSLS
460 470 480 490 500
ALHFSEDEIA LYTALVLINA NRPGLQEKRK VEQLQYNLEL AFHHHLCKTH
510 520 530 540 550
RQSILAKLPP KGKLRSLCSQ HVERLQIFQH LHPIVVQAAF PPLYKELFST
560
ETESPVGLSK
Length:560
Mass (Da):62,225
Last modified:March 28, 2018 - v1
Checksum:iE132B7C2119AA0EF
GO

Genome annotation databases

EnsembliENSMLET00000057827; ENSMLEP00000034240; ENSMLEG00000041292

Similar proteinsi

Entry informationi

Entry nameiA0A2K6A2E8_MANLE
AccessioniPrimary (citable) accession number: A0A2K6A2E8
Entry historyiIntegrated into UniProtKB/TrEMBL: March 28, 2018
Last sequence update: March 28, 2018
Last modified: June 20, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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