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Protein
Submitted name:

CCHC-type zinc finger nucleic acid binding protein

Gene

CNBP

Organism
Cebus capucinus imitator
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
CCHC-type zinc finger nucleic acid binding proteinImported
Gene namesi
Name:CNBPImported
OrganismiCebus capucinus imitatorImported
Taxonomic identifieri1737458 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniPlatyrrhiniCebidaeCebinaeCebus
Proteomesi
  • UP000233040 Componenti: Whole Genome Shotgun Assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Structurei

3D structure databases

SMRiA0A2K5RV72
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 20CCHC-typeInterPro annotationAdd BLAST15
Domaini54 – 67CCHC-typeInterPro annotationAdd BLAST14
Domaini74 – 89CCHC-typeInterPro annotationAdd BLAST16
Domaini98 – 111CCHC-typeInterPro annotationAdd BLAST14
Domaini118 – 134CCHC-typeInterPro annotationAdd BLAST17
Domaini136 – 152CCHC-typeInterPro annotationAdd BLAST17
Domaini158 – 171CCHC-typeInterPro annotationAdd BLAST14

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

GeneTreeiENSGT00510000047065

Family and domain databases

InterProiView protein in InterPro
IPR001878 Znf_CCHC
IPR036875 Znf_CCHC_sf
PfamiView protein in Pfam
PF00098 zf-CCHC, 7 hits
SMARTiView protein in SMART
SM00343 ZnF_C2HC, 7 hits
SUPFAMiSSF57756 SSF57756, 4 hits
PROSITEiView protein in PROSITE
PS50158 ZF_CCHC, 7 hits

Sequencei

Sequence statusi: Complete.

A0A2K5RV72-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSSNECFKCG RSGHWARECP TGGGRGRGMR SRGRGGFTSD RGFQFVSSSL
60 70 80 90 100
PDICYRCGES GHLAKDCDLQ EDACYNCGRG GHIAKDCKEP KREREQCCYN
110 120 130 140 150
CGKPGHLARD CDHADEQKCY SCGEFGHIQK DCTKVKCYRC GETGHVAINC
160 170
SKTSEVNCYR CGESGHLARE CTIEATA
Length:177
Mass (Da):19,463
Last modified:March 28, 2018 - v1
Checksum:i996F398285F52618
GO

Sequence databases

RefSeqiXP_017367425.1, XM_017511936.1

Genome annotation databases

EnsembliENSCCAT00000049807; ENSCCAP00000032052; ENSCCAG00000034056
GeneIDi108291515

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_017367425.1, XM_017511936.1

3D structure databases

SMRiA0A2K5RV72
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSCCAT00000049807; ENSCCAP00000032052; ENSCCAG00000034056
GeneIDi108291515

Organism-specific databases

CTDi7555

Phylogenomic databases

GeneTreeiENSGT00510000047065

Family and domain databases

InterProiView protein in InterPro
IPR001878 Znf_CCHC
IPR036875 Znf_CCHC_sf
PfamiView protein in Pfam
PF00098 zf-CCHC, 7 hits
SMARTiView protein in SMART
SM00343 ZnF_C2HC, 7 hits
SUPFAMiSSF57756 SSF57756, 4 hits
PROSITEiView protein in PROSITE
PS50158 ZF_CCHC, 7 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2K5RV72_CEBCA
AccessioniPrimary (citable) accession number: A0A2K5RV72
Entry historyiIntegrated into UniProtKB/TrEMBL: March 28, 2018
Last sequence update: March 28, 2018
Last modified: September 12, 2018
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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