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Protein
Submitted name:

Zinc finger and SCAN domain containing 23

Gene

ZSCAN23

Organism
Colobus angolensis palliatus (Peters' Angolan colobus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger and SCAN domain containing 23Imported
Gene namesi
Name:ZSCAN23Imported
OrganismiColobus angolensis palliatus (Peters' Angolan colobus)Imported
Taxonomic identifieri336983 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniCercopithecidaeColobinaeColobus
Proteomesi
  • UP000233080 Componenti: Whole Genome Shotgun Assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini48 – 130SCAN boxInterPro annotationAdd BLAST83
Domaini249 – 276C2H2-typeInterPro annotationAdd BLAST28
Domaini277 – 304C2H2-typeInterPro annotationAdd BLAST28
Domaini305 – 332C2H2-typeInterPro annotationAdd BLAST28
Domaini333 – 360C2H2-typeInterPro annotationAdd BLAST28
Domaini361 – 388C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

RepeatSAAS annotation, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00760000118881

Family and domain databases

CDDicd07936 SCAN, 1 hit
Gene3Di1.10.4020.10, 1 hit
InterProiView protein in InterPro
IPR003309 SCAN_dom
IPR038269 SCAN_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF02023 SCAN, 1 hit
SMARTiView protein in SMART
SM00431 SCAN, 1 hit
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF57667 SSF57667, 3 hits
PROSITEiView protein in PROSITE
PS50804 SCAN_BOX, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 5 hits
PS50157 ZINC_FINGER_C2H2_2, 5 hits

Sequencei

Sequence statusi: Complete.

A0A2K5HFW8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAITLTLQTA EMQEGLLAVK VKEEEEEHSC GPESGLSRNN PHTREIFRRR
60 70 80 90 100
FRQFCYQETP GPREALRRLQ ELCHQWLRPE MHTKEQILEL LVLEQFLSIL
110 120 130 140 150
PEELQAWVRE HRPVSGEEAV TVLEDLEREL DEPGEQVLSH AHEQEEFVKE
160 170 180 190 200
KATPGAAQES SNDQFQTLEE QLRYNLREVC PVQEIDGKAG TWNVELAPKR
210 220 230 240 250
EISQEVKSLV QVPGKLNGNI TQMPEYGAIC DHEGRLEKQR VSSSVERPYI
260 270 280 290 300
CNECGKSFTQ NSILIEHQRT HTGEKPYECD ECGRAFSQRS GLFQHQRLHT
310 320 330 340 350
GEKHYQCSVC GKAFSQNAGL FHHLRIHTGE KPYQCNQCNK SFSRRSVLIK
360 370 380
HQRIHTGERP YECEECGKNF IYHCNLIQHR KVHPVAKSS
Length:389
Mass (Da):45,027
Last modified:March 28, 2018 - v1
Checksum:i3D8A8B7395A9AAEA
GO

Sequence databases

RefSeqiXP_011800277.1, XM_011944887.1
XP_011800279.1, XM_011944889.1

Genome annotation databases

EnsembliENSCANT00000012887; ENSCANP00000003210; ENSCANG00000011616
GeneIDi105513853

Similar proteinsi

Entry informationi

Entry nameiA0A2K5HFW8_COLAP
AccessioniPrimary (citable) accession number: A0A2K5HFW8
Entry historyiIntegrated into UniProtKB/TrEMBL: March 28, 2018
Last sequence update: March 28, 2018
Last modified: July 18, 2018
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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