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Entry version 8 (26 Feb 2020)
Sequence version 1 (28 Mar 2018)
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Protein

RWP-RK domain-containing protein

Gene

CHLRE_04g218050v5

Organism
Chlamydomonas reinhardtii (Chlamydomonas smithii)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
RWP-RK domain-containing proteinInterPro annotation
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:CHLRE_04g218050v5Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiChlamydomonas reinhardtii (Chlamydomonas smithii)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3055 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeChlorophytaChlorophyceaeChlamydomonadalesChlamydomonadaceaeChlamydomonas
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006906 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 4

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
A0A2K3DU19 baseline and differential

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini119 – 204RWP-RKInterPro annotationAdd BLAST86

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 61DisorderedSequence analysisAdd BLAST61
Regioni98 – 132DisorderedSequence analysisAdd BLAST35
Regioni249 – 286DisorderedSequence analysisAdd BLAST38
Regioni375 – 607DisorderedSequence analysisAdd BLAST233
Regioni623 – 752DisorderedSequence analysisAdd BLAST130
Regioni818 – 887DisorderedSequence analysisAdd BLAST70
Regioni1030 – 1089DisorderedSequence analysisAdd BLAST60
Regioni1107 – 1233DisorderedSequence analysisAdd BLAST127
Regioni1272 – 1333DisorderedSequence analysisAdd BLAST62
Regioni1380 – 1405DisorderedSequence analysisAdd BLAST26
Regioni1445 – 1741DisorderedSequence analysisAdd BLAST297
Regioni1815 – 1839DisorderedSequence analysisAdd BLAST25

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili1345 – 1365Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1 – 15PolarSequence analysisAdd BLAST15
Compositional biasi400 – 418PolarSequence analysisAdd BLAST19
Compositional biasi510 – 524PolarSequence analysisAdd BLAST15
Compositional biasi559 – 580PolarSequence analysisAdd BLAST22
Compositional biasi629 – 670PolarSequence analysisAdd BLAST42
Compositional biasi686 – 752PolarSequence analysisAdd BLAST67
Compositional biasi844 – 858PolarSequence analysisAdd BLAST15
Compositional biasi1030 – 1053PolarSequence analysisAdd BLAST24
Compositional biasi1219 – 1233PolarSequence analysisAdd BLAST15
Compositional biasi1458 – 1478Pro-richSequence analysisAdd BLAST21
Compositional biasi1493 – 1511PolarSequence analysisAdd BLAST19
Compositional biasi1533 – 1547Pro-richSequence analysisAdd BLAST15
Compositional biasi1548 – 1577PolarSequence analysisAdd BLAST30
Compositional biasi1694 – 1734PolarSequence analysisAdd BLAST41

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR003035 RWP-RK_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF02042 RWP-RK, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51519 RWP_RK, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A2K3DU19-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MQRIGPGSWQ SQPSHDAPLG RDYPLHGFSL PPDEGPHRPG PGAGHFHHPH
60 70 80 90 100
QHHGHGTDSH LGVRHAPLKA AAGASGRGPS QALHAFPNAL LEYHQKQEPM
110 120 130 140 150
SDDDDNDGDG EGAGRGSGGP NSASGAGNVG DALDDALPLS ELQQVYHLPS
160 170 180 190 200
KEAARQLGVS LSRLKRSCRA HNVLRWPHRK LASLHNLRDT IRNDRNMKPP
210 220 230 240 250
DKERIQAQIS TELAAVIANP DHTIDTRLDE IRQAKYKLKY YHKTKHIHAA
260 270 280 290 300
ASAARRKRAS TGADGPEPSA NSAGGSGSGA GGAAGGGQGG YGAASVALTL
310 320 330 340 350
PGGGIDVTSP AASMLTGGGG GPMPSASVIT TATGVTTTEV MGSGGGPRLS
360 370 380 390 400
YTSGAGASGL GGGGLVGGGG GARLSGSGLA WPPQAPGGNG GGGGGGGGTP
410 420 430 440 450
WQPSSGSWQQ QPQPWSGVSA FSGGGGGGFG GGHGGRGGVQ GNDIVALGDT
460 470 480 490 500
GGGNGGDGGR GGGGDPMSRA GSLTSGAPLP QLPPGGRYTG GSNSSVQLPH
510 520 530 540 550
PPPLSLGPHF GSAPSQSQSH TGALLQLPPA LPPTVQPPQH SQHQQQHYPP
560 570 580 590 600
IHSGVRPHPH SPQQPSLQQQ QQQQQYAAGG GSGSGMRLQR SLHGDASGGG
610 620 630 640 650
PASGDFGGGG GMYGGANNVL RRPSYGVSDE TPGTGSGFGF QHQAQQEQQH
660 670 680 690 700
NHNQHMHMQN QQQQHSPPAS VVYGHSGGRP HSQPHPHQDP SLQQYPEGPA
710 720 730 740 750
SGPSSGPLSG QPWHQQPQMQ QQQQQMQAPN QTQNQPSLLQ LHQQQQQQQH
760 770 780 790 800
AAAAAAAANA AAVARHMSGD LDTAMEVERA AGAGAGTAGA SGAGASTMSH
810 820 830 840 850
GVIDTACAPV GQQGQGQEAA AAQVARHTSA SGAAPAAGGR VGQWSTAPQL
860 870 880 890 900
NRQTSAPGPR HSYGGHVSHY PDIGSSSGGA HGAGAAASPP EFLFTTAGAT
910 920 930 940 950
AGAPGSGHHP GVPGDMQPAP GGRVRMHSVD GAGFGISGGA GHFGSGAGHF
960 970 980 990 1000
GSGAGHYGSP GPYGGAHPYG HSGGMGSYGM PGSGGHGPGG GGGYGSFGHG
1010 1020 1030 1040 1050
PGGGGAPAGG FGGGRERFYS VDGSSFSFPA TAPNSTGTGY PSLPASRQSA
1060 1070 1080 1090 1100
AGSSFAAGGG GGGGHSFHAG PPPALPSSAP AYGRAPYDSG VQTPGMSSVY
1110 1120 1130 1140 1150
GTALTPVAAA PPPGHGTPDA GGADLAPAPT LTTLLQPRRS DGGAGGGSGL
1160 1170 1180 1190 1200
GSLPEGSAVA HQQPHQHAHQ HHMLHPLPGC SPTGGPGGGG GGGGGGMSHA
1210 1220 1230 1240 1250
EAVRQHLLAP RDRAGSGRLT GTGSGSIGTN SGGGSAFALA GRSSIGRDGG
1260 1270 1280 1290 1300
AAGVGGGVGL SPAEIAAQLR ASAVSGGGPP AFDRRSDSGE VATATAGAEP
1310 1320 1330 1340 1350
LLLPSAGSPA TAVDGSGGGM GRRPSMGSGG GVTADDGSSA LAVAMAAAAA
1360 1370 1380 1390 1400
DVNAAASRMQ QVQQQFYSRS VTTGAPAAAP FMQRSTSSGG GAATPGATAL
1410 1420 1430 1440 1450
PAALPPGPAT GAPGLGFGMG MPPASADARG MAAAAAALGD GPSWMELGSV
1460 1470 1480 1490 1500
NSGQMPSFQP HAPPPPQRPQ PQEHPFPQQL HPGQPQAAAD DAQLRYQYQQ
1510 1520 1530 1540 1550
HQHQQHSHGS GSGGGAALPP GCHTVTTGRY GSPPDQPPAP PPTAMATAGS
1560 1570 1580 1590 1600
PPSSTAGTYP SPGGGSPDLS TTPPAGGSGA GASGGVAAMQ ADGGQPRAQA
1610 1620 1630 1640 1650
AAAAPPSRAN RQPYLDDLAA ALYDTLDDTD FGGGRRGGGG GGGRGRRGGA
1660 1670 1680 1690 1700
TLVDDGDDDT DGDYDDDQDQ PGPAGRGGRG VAAAAGGATG TAGTTPMRMG
1710 1720 1730 1740 1750
SSAELVSGSH QPQQQHQSPS PDQMQHQQLQ DGSGSDGGGA AAAAAAGGAV
1760 1770 1780 1790 1800
TVAAAGAVAA AAAAAAGGGD GGLTGGAPPG ANSGAIPAAL LLSSGTIMST
1810 1820 1830
GGGGGTLASL DWMLMDAQNT PPGGANGQLL PPPPSPPRQ
Length:1,839
Mass (Da):178,771
Last modified:March 28, 2018 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i37FAFAEF2C991175
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CM008965 Genomic DNA Translation: PNW84023.1
CM008965 Genomic DNA Translation: PNW84024.1

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
PNW84023; PNW84023; CHLRE_04g218050v5
PNW84024; PNW84024; CHLRE_04g218050v5

Gramene; a comparative resource for plants

More...
Gramenei
PNW84023; PNW84023; CHLRE_04g218050v5
PNW84024; PNW84024; CHLRE_04g218050v5

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM008965 Genomic DNA Translation: PNW84023.1
CM008965 Genomic DNA Translation: PNW84024.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblPlantsiPNW84023; PNW84023; CHLRE_04g218050v5
PNW84024; PNW84024; CHLRE_04g218050v5
GrameneiPNW84023; PNW84023; CHLRE_04g218050v5
PNW84024; PNW84024; CHLRE_04g218050v5

Gene expression databases

ExpressionAtlasiA0A2K3DU19 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR003035 RWP-RK_dom
PfamiView protein in Pfam
PF02042 RWP-RK, 1 hit
PROSITEiView protein in PROSITE
PS51519 RWP_RK, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A2K3DU19_CHLRE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A2K3DU19
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: March 28, 2018
Last sequence update: March 28, 2018
Last modified: February 26, 2020
This is version 8 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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Main funding by: National Institutes of Health

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