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Protein
Submitted name:

SNRNP35 isoform 2

Gene

CR201_G0000792

Organism
Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
SNRNP35 isoform 2Imported
Submitted name:
SNRNP35 isoform 3Imported
Gene namesi
ORF Names:CR201_G0000792Imported
OrganismiPongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii)Imported
Taxonomic identifieri9601 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePongo

Structurei

3D structure databases

SMRiA0A2J8XJ68
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini51 – 129RRMInterPro annotationAdd BLAST79

Phylogenomic databases

KOiK13155

Family and domain databases

CDDicd12237 RRM_snRNP35, 1 hit
Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
IPR034146 snRNP35_RRM
PfamiView protein in Pfam
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit

Sequencei

Sequence statusi: Complete.

A0A2J8XJ68-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNDWMPIAKE YDPLKAGSID GTDEDPHDRA VWRAMLARYV PNKGVIGDPL
60 70 80 90 100
LTLFVARLNL QTKEDKLKEV FSRYGDIRRL RLVRDLVTGF SKGYAFIEYK
110 120 130 140 150
EERAVIKAYR DADGLVIDQH EIFVDYELER TLKGWIPRRL GGGLGGKKES
160 170 180 190 200
GQLRFGGRDR PFRKPINLPV VKNDLYREGK RERRERSRSR ERHWDSRTRD
210 220 230 240
RDHDRGREKR WQEREPTRVW PDNDWERERD FRDDRIKGRE KKERGK
Length:246
Mass (Da):29,450
Last modified:March 28, 2018 - v1
Checksum:iE420E6D719D3B0C7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
NDHI03003364 Genomic DNA Translation: PNJ82053.1
NDHI03003364 Genomic DNA Translation: PNJ82054.1
RefSeqiXP_009246654.1, XM_009248379.1

Genome annotation databases

GeneIDi100452130
KEGGipon:100452130

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
NDHI03003364 Genomic DNA Translation: PNJ82053.1
NDHI03003364 Genomic DNA Translation: PNJ82054.1
RefSeqiXP_009246654.1, XM_009248379.1

3D structure databases

SMRiA0A2J8XJ68
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi100452130
KEGGipon:100452130

Organism-specific databases

CTDi11066

Phylogenomic databases

KOiK13155

Family and domain databases

CDDicd12237 RRM_snRNP35, 1 hit
Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
IPR034146 snRNP35_RRM
PfamiView protein in Pfam
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2J8XJ68_PONAB
AccessioniPrimary (citable) accession number: A0A2J8XJ68
Entry historyiIntegrated into UniProtKB/TrEMBL: March 28, 2018
Last sequence update: March 28, 2018
Last modified: July 18, 2018
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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