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UniProtKB - A0A2J8USZ6 (A0A2J8USZ6_PONAB)
Protein
DNA helicase
Gene
CR201_G0025193
Organism
Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii)
Status
Functioni
Caution
The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported
Catalytic activityi
- EC:3.6.4.12ARBA annotation
GO - Molecular functioni
- ATP binding Source: UniProtKB-KW
- ATP-dependent chromatin remodeler activity Source: InterPro
- ATP hydrolysis activity Source: RHEA
- chromatin binding Source: Ensembl
- chromo shadow domain binding Source: Ensembl
- DNA helicase activity Source: UniProtKB-EC
- DNA translocase activity Source: Ensembl
- metal ion binding Source: UniProtKB-KW
- methylated histone binding Source: Ensembl
GO - Biological processi
- cellular response to hydroxyurea Source: Ensembl
- chromosome organization involved in meiotic cell cycle Source: Ensembl
- DNA damage response, signal transduction by p53 class mediator Source: Ensembl
- DNA repair Source: UniProtKB-KW
- DNA replication-independent chromatin assembly Source: Ensembl
- forebrain development Source: Ensembl
- meiotic spindle organization Source: Ensembl
- multicellular organism growth Source: Ensembl
- negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric Source: Ensembl
- negative regulation of telomeric RNA transcription from RNA pol II promoter Source: Ensembl
- nucleosome assembly Source: Ensembl
- positive regulation of nuclear cell cycle DNA replication Source: Ensembl
- positive regulation of telomere maintenance Source: Ensembl
- positive regulation of telomeric RNA transcription from RNA pol II promoter Source: Ensembl
- post-embryonic forelimb morphogenesis Source: Ensembl
- protein localization to chromosome, telomeric region Source: Ensembl
- regulation of histone H3-K9 trimethylation Source: Ensembl
- replication fork processing Source: Ensembl
- seminiferous tubule development Source: Ensembl
- Sertoli cell development Source: Ensembl
- spermatogenesis Source: Ensembl
Keywordsi
Biological process | DNA damage, DNA repairARBA annotation |
Ligand | ATP-bindingARBA annotation, Metal-binding, Nucleotide-binding, Zinc |
Names & Taxonomyi
Protein namesi | Recommended name: DNA helicaseARBA annotation (EC:3.6.4.12ARBA annotation)Alternative name(s): ATP-dependent helicase ATRXARBA annotation |
Gene namesi | ORF Names:CR201_G0025193Imported |
Organismi | Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii)Imported |
Taxonomic identifieri | 9601 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Pongo |
Proteomesi |
|
Subcellular locationi
Nucleus
- nuclear chromosome Source: Ensembl
- PML body Source: Ensembl
Other locations
- chromosome, subtelomeric region Source: Ensembl
- condensed chromosome, centromeric region Source: Ensembl
- pericentric heterochromatin Source: Ensembl
Keywords - Cellular componenti
Chromosome, NucleusARBA annotation, TelomereARBA annotationInteractioni
GO - Molecular functioni
- chromo shadow domain binding Source: Ensembl
- methylated histone binding Source: Ensembl
Protein-protein interaction databases
STRINGi | 9601.ENSPPYP00000022935 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 159 – 296 | PHD-typeInterPro annotationAdd BLAST | 138 | |
Domaini | 1581 – 1768 | Helicase ATP-bindingInterPro annotationAdd BLAST | 188 | |
Domaini | 2025 – 2205 | Helicase C-terminalInterPro annotationAdd BLAST | 181 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 146 | DisorderedSequence analysisAdd BLAST | 146 | |
Regioni | 457 – 581 | DisorderedSequence analysisAdd BLAST | 125 | |
Regioni | 593 – 619 | DisorderedSequence analysisAdd BLAST | 27 | |
Regioni | 652 – 949 | DisorderedSequence analysisAdd BLAST | 298 | |
Regioni | 967 – 1479 | DisorderedSequence analysisAdd BLAST | 513 | |
Regioni | 1913 – 2000 | DisorderedSequence analysisAdd BLAST | 88 | |
Regioni | 2462 – 2492 | DisorderedSequence analysisAdd BLAST | 31 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 1490 – 1518 | Sequence analysisAdd BLAST | 29 | |
Coiled coili | 2321 – 2341 | Sequence analysisAdd BLAST | 21 | |
Coiled coili | 2411 – 2431 | Sequence analysisAdd BLAST | 21 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 32 – 61 | Polar residuesSequence analysisAdd BLAST | 30 | |
Compositional biasi | 69 – 83 | Polar residuesSequence analysisAdd BLAST | 15 | |
Compositional biasi | 109 – 124 | Polar residuesSequence analysisAdd BLAST | 16 | |
Compositional biasi | 471 – 485 | Polar residuesSequence analysisAdd BLAST | 15 | |
Compositional biasi | 486 – 506 | Basic and acidic residuesSequence analysisAdd BLAST | 21 | |
Compositional biasi | 534 – 577 | Polar residuesSequence analysisAdd BLAST | 44 | |
Compositional biasi | 663 – 679 | Polar residuesSequence analysisAdd BLAST | 17 | |
Compositional biasi | 680 – 706 | Basic and acidic residuesSequence analysisAdd BLAST | 27 | |
Compositional biasi | 707 – 731 | Polar residuesSequence analysisAdd BLAST | 25 | |
Compositional biasi | 755 – 798 | Basic and acidic residuesSequence analysisAdd BLAST | 44 | |
Compositional biasi | 811 – 829 | Basic and acidic residuesSequence analysisAdd BLAST | 19 | |
Compositional biasi | 839 – 864 | Basic and acidic residuesSequence analysisAdd BLAST | 26 | |
Compositional biasi | 871 – 912 | Basic and acidic residuesSequence analysisAdd BLAST | 42 | |
Compositional biasi | 922 – 949 | Basic and acidic residuesSequence analysisAdd BLAST | 28 | |
Compositional biasi | 967 – 1007 | Basic and acidic residuesSequence analysisAdd BLAST | 41 | |
Compositional biasi | 1015 – 1030 | Basic and acidic residuesSequence analysisAdd BLAST | 16 | |
Compositional biasi | 1037 – 1095 | Basic and acidic residuesSequence analysisAdd BLAST | 59 | |
Compositional biasi | 1104 – 1144 | Basic and acidic residuesSequence analysisAdd BLAST | 41 | |
Compositional biasi | 1170 – 1191 | Basic residuesSequence analysisAdd BLAST | 22 | |
Compositional biasi | 1194 – 1210 | Polar residuesSequence analysisAdd BLAST | 17 | |
Compositional biasi | 1226 – 1251 | Polar residuesSequence analysisAdd BLAST | 26 | |
Compositional biasi | 1267 – 1288 | Basic and acidic residuesSequence analysisAdd BLAST | 22 | |
Compositional biasi | 1295 – 1335 | Basic and acidic residuesSequence analysisAdd BLAST | 41 | |
Compositional biasi | 1343 – 1362 | Basic and acidic residuesSequence analysisAdd BLAST | 20 | |
Compositional biasi | 1394 – 1419 | Basic and acidic residuesSequence analysisAdd BLAST | 26 | |
Compositional biasi | 1439 – 1468 | Acidic residuesSequence analysisAdd BLAST | 30 | |
Compositional biasi | 1941 – 1955 | Polar residuesSequence analysisAdd BLAST | 15 | |
Compositional biasi | 1969 – 1998 | Polar residuesSequence analysisAdd BLAST | 30 | |
Compositional biasi | 2469 – 2483 | Pro residuesSequence analysisAdd BLAST | 15 |
Keywords - Domaini
Coiled coilSequence analysis, Zinc-fingerARBA annotationPhylogenomic databases
OrthoDBi | 815681at2759 |
Family and domain databases
Gene3Di | 3.30.40.10, 1 hit 3.40.50.10810, 1 hit 3.40.50.300, 2 hits |
InterProi | View protein in InterPro IPR025766, ADD IPR041430, ADD_ATRX IPR014001, Helicase_ATP-bd IPR001650, Helicase_C IPR027417, P-loop_NTPase IPR038718, SNF2-like_sf IPR000330, SNF2_N IPR011011, Znf_FYVE_PHD IPR013083, Znf_RING/FYVE/PHD |
Pfami | View protein in Pfam PF17981, ADD_ATRX, 1 hit PF00271, Helicase_C, 1 hit PF00176, SNF2-rel_dom, 1 hit |
SMARTi | View protein in SMART SM00487, DEXDc, 1 hit SM00490, HELICc, 1 hit |
SUPFAMi | SSF52540, SSF52540, 2 hits SSF57903, SSF57903, 1 hit |
PROSITEi | View protein in PROSITE PS51533, ADD, 1 hit PS51192, HELICASE_ATP_BIND_1, 1 hit PS51194, HELICASE_CTER, 1 hit |
i Sequence
Sequence statusi: Complete.
A0A2J8USZ6-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MTAEPMSESK LNTLVQKLHD FLAHSSEESE ETSSPPRLAM NQNTDKISGS
60 70 80 90 100
GSNSDMMENS KEEGTSSSEK SKSSGSSRSK RKPSIVTKYV ESDDEKPLDD
110 120 130 140 150
ETVNEDASNE NSENDITMQS LPKGTVIVQP EPVLNEDKDD FKGPEFRSRS
160 170 180 190 200
KMKTENLKKR GEDGLHGIVS CTACGQQVNH FQKDSIYRHP SLQVLICKNC
210 220 230 240 250
FKYYMSDDIS RDSDGMDEQC RWCAEGGNLI CCDFCHNAFC KKCILRNLGR
260 270 280 290 300
KELSTIMDEN NQWYCYICHP EPLLDLVTAC NSVFDNLEQL LQQNKKKIKV
310 320 330 340 350
DSEKSNKVYE HTSRFSPKKT SSNCNGEEKK LDDSCSGSVT YSYSALIVPK
360 370 380 390 400
EMIKKAKKLI ETTANMNSSY VKFLKQATDN SEINSATKLR QLKAFKSVLA
410 420 430 440 450
DIKKAHLALE EDLNSEFRAM DAVSKEKNTK EHKVIEAKFE TKARKGEKPC
460 470 480 490 500
ALEKKDISKS EAKLSRKQVD SEHMYQNVPT EEQRANKSTG GEHKKSDRKE
510 520 530 540 550
EPQYEPANTS EDLDMDIVSV PSSVPEDIFE NLETAMEVQS SVDHQGDGSS
560 570 580 590 600
GTEQEVESSS VKLSISSKDN RGGIKSKTTA KVTKELYVKL TPVSLSNSPI
610 620 630 640 650
KGADCQEVPQ DKDGYKSCGL NPKLEKCGLG QENSDNEHLV ENEVSLLLEE
660 670 680 690 700
SDLRRSPRVK TTPLRRQTET NPVTSNSDEE CNETVKEKQK LSVPVRKKDK
710 720 730 740 750
RNSSDSAIDN PKPNKLPKSK QSETVDQNSD SDEMLAILKE VSRMSHSSSS
760 770 780 790 800
DTDINEIHTN HKTLYDLKTQ AGKDDKGKRK RKSSTSGSDF DTKKGKSAKS
810 820 830 840 850
SIISKKKRQT QSESSNYDSE LEKEIKSMSK IGAARTTKKR IPNTKDFDSS
860 870 880 890 900
EDEKHSKKGM DNQGHKNLKT SQEGSSDDAE RKQERENFSS AEGTVDKDTT
910 920 930 940 950
IMELRDRLPK KQQASASTDG VDKLSGKEEG FTSLEVRKVA ETKEKSKHLK
960 970 980 990 1000
TKICKKVQDG LSDITEKFLK KDQSDETSED DKKQSKKGTE EKKKTSDFKK
1010 1020 1030 1040 1050
KVIKMEQQYE SSSDGTEKLP EREEICHFPK GIKQIKNGTT DGEKKNKKIR
1060 1070 1080 1090 1100
DKTSKKKDEL SDYAEKSTGK GDSCDSSEDK KSKNGAYGRE KKRCTLLGKS
1110 1120 1130 1140 1150
SRKRQDCSSS DTEKYSMKED GCNSSDKRLK RIELRERRNL SSKRNTKEIQ
1160 1170 1180 1190 1200
SGSSSSDAEE SSEDNKKKKQ RTSSKKKAVI VKEKKRNSLR TSTKRKQADI
1210 1220 1230 1240 1250
TSSSSSDIED DDQNSIGEGS SDEQKIKPVT ENLVLSSHTG FCQSSGDEAL
1260 1270 1280 1290 1300
SKSVPVTVDD DDDDNDPENR IAKKMLLEEI KANLSSDEDG SSDDEPEEGK
1310 1320 1330 1340 1350
KRTGKQNEEN PGDEEAKNQV NSESDSDSEE SKKPRYRHRL LRHKLTVSDG
1360 1370 1380 1390 1400
ESGEEKKTKP KEHKEVKGRN RRKVSSEDSE DSDFQESGVS EEVSESEDEQ
1410 1420 1430 1440 1450
RPRTRSAKKA ELEENQRSYK QKKKRRRIKV QEDSSSENKS NSEEEEEEKE
1460 1470 1480 1490 1500
EEEEEEEEEE EEEEDENDDS KSPGKGRKKI RKILKDDKLR TETQNALKEE
1510 1520 1530 1540 1550
EERRKRIAER EREREKLREV IEIEDASPTK CPITTKLVLD EDEETKEPLV
1560 1570 1580 1590 1600
QVHRNMVIKL KPHQVDGVQF MWDCCCESVK KTKKSPGSGC ILAHCMGLGK
1610 1620 1630 1640 1650
TLQVVSFLHT VLLCDKLDFS TALVVCPLNT ALNWMNEFEK WQEGLKDDEK
1660 1670 1680 1690 1700
LEVSELATVK RPQERSYMLQ RWQEDGGVMI IGYEMYRNLA QGRNVKSRKL
1710 1720 1730 1740 1750
KEIFNKALVD PGPDFVVCDE GHILKNEASA VSKAMNSIRS RRRIILTGTP
1760 1770 1780 1790 1800
LQNNLIEYHC MVNFIKENLL GSIKEFRNRF INPIQNGQCA DSTMVDVRVM
1810 1820 1830 1840 1850
KKRAHILYEM LAGCVQRKDY TALTKFLPPK HEYVLAVRMT SIQCKLYQYY
1860 1870 1880 1890 1900
LDHLTGVGNN SEGGRGKAGA KLFQDFQMLS RIWTHPWCLQ LDYISKENKG
1910 1920 1930 1940 1950
YFDEDSMDEF IASDSDETSM SLSSDDYTKK KKKGKKGKKD SSSSGSGSDN
1960 1970 1980 1990 2000
DVEVIKVWNS RSRGGGEGNV DETGNNPSVS LKLEESKATS SSNPSSPAPD
2010 2020 2030 2040 2050
WYKDFVTDAD AEVLEHSGKM VLLFEILRMA EEIGDKVLVF SQSLISLDLI
2060 2070 2080 2090 2100
EDFLELASRE KTEDKDKPLI YKGEGKWLRN IDYYRLDGST TAQSRKKWAE
2110 2120 2130 2140 2150
EFNDETNVRG RLFIISTKAG SLGINLVAAN RVIIFDASWN PSYDIQSIFR
2160 2170 2180 2190 2200
VYRFGQTKPV YVYRFLAQGT MEDKIYDRQV TKQSLSFRVV DQQQVERHFT
2210 2220 2230 2240 2250
MNELTELYTF EPDLLDDPNS EKKKKRDTPM LPKDTILAEL LQIHKEHIVG
2260 2270 2280 2290 2300
YHEHDSLLDH KEEEELTEEE RKAAWAEYEA EKKGLTMRFN IPTGTNLPPV
2310 2320 2330 2340 2350
SFNSQTPYIP FNLGALSAMS NQQLEDLINQ GREKVVEATN SVTAVRIQPL
2360 2370 2380 2390 2400
EDIISAVWKE NMNLSEAQVQ ALALSRQASQ ELDVKRREAI YNDVLTKQQM
2410 2420 2430 2440 2450
LISCVQRILM NRRLQQQYNQ QQQQQMTYQQ ATLGHLMMPK PPNLIMNPSN
2460 2470 2480 2490
YQQIDMRGMY QPVAGGMQPP PLQRAPPPMR SKNPGPSQGK SM
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | NDHI03003445 Genomic DNA Translation: PNJ48401.1 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | NDHI03003445 Genomic DNA Translation: PNJ48401.1 |
3D structure databases
SMRi | A0A2J8USZ6 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 9601.ENSPPYP00000022935 |
Phylogenomic databases
OrthoDBi | 815681at2759 |
Family and domain databases
Gene3Di | 3.30.40.10, 1 hit 3.40.50.10810, 1 hit 3.40.50.300, 2 hits |
InterProi | View protein in InterPro IPR025766, ADD IPR041430, ADD_ATRX IPR014001, Helicase_ATP-bd IPR001650, Helicase_C IPR027417, P-loop_NTPase IPR038718, SNF2-like_sf IPR000330, SNF2_N IPR011011, Znf_FYVE_PHD IPR013083, Znf_RING/FYVE/PHD |
Pfami | View protein in Pfam PF17981, ADD_ATRX, 1 hit PF00271, Helicase_C, 1 hit PF00176, SNF2-rel_dom, 1 hit |
SMARTi | View protein in SMART SM00487, DEXDc, 1 hit SM00490, HELICc, 1 hit |
SUPFAMi | SSF52540, SSF52540, 2 hits SSF57903, SSF57903, 1 hit |
PROSITEi | View protein in PROSITE PS51533, ADD, 1 hit PS51192, HELICASE_ATP_BIND_1, 1 hit PS51194, HELICASE_CTER, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | A0A2J8USZ6_PONAB | |
Accessioni | A0A2J8USZ6Primary (citable) accession number: A0A2J8USZ6 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | March 28, 2018 |
Last sequence update: | March 28, 2018 | |
Last modified: | May 25, 2022 | |
This is version 20 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |