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Protein
Submitted name:

RBPJ isoform 1

Gene

RBPJ

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
RBPJ isoform 1Imported
Submitted name:
RBPJ isoform 3Imported
Submitted name:
RBPJ isoform 4Imported
Submitted name:
Recombination signal binding protein for immunoglobulin kappa J regionImported
Gene namesi
Name:RBPJImported
ORF Names:CK820_G0007571Imported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
Proteomesi
  • UP000002277 Componenti: Chromosome 4

Organism-specific databases

VGNCiVGNC:675 RBPJ

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Structurei

3D structure databases

SMRiA0A2J8NVV9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini33 – 164LAG1_DNAbindInterPro annotationAdd BLAST132
Domaini165 – 314BTDInterPro annotationAdd BLAST150

Phylogenomic databases

GeneTreeiENSGT00390000005197

Family and domain databases

CDDicd01176 IPT_RBP-Jkappa, 1 hit
Gene3Di2.60.40.10, 1 hit
2.60.40.1450, 2 hits
InterProiView protein in InterPro
IPR015350 Beta-trefoil_DNA-bd_dom
IPR036358 BTD_sf
IPR013783 Ig-like_fold
IPR014756 Ig_E-set
IPR008967 p53-like_TF_DNA-bd
IPR015351 RBP-J/Cbf11/Cbf12_DNA-bd
IPR037095 RBP-J/Cbf11/Cbf12_DNA-bd_sf
IPR038007 RBP-Jkappa_IPT
PfamiView protein in Pfam
PF09270 BTD, 1 hit
PF09271 LAG1-DNAbind, 1 hit
SMARTiView protein in SMART
SM01268 BTD, 1 hit
SM01267 LAG1_DNAbind, 1 hit
SUPFAMiSSF110217 SSF110217, 1 hit
SSF49417 SSF49417, 1 hit
SSF81296 SSF81296, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.Show allAlign All

A0A2J8NVV9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAWIKRKFGE RPPPKRLTRE AMRNYLKERG DQTVLILHAK VAQKSYGNEK
60 70 80 90 100
RFFCPPPCVY LMGSGWKKKK EQMERDGCSE QESQPCAFIG IGNSDQEMQQ
110 120 130 140 150
LNLEGKNYCT AKTLYISDSD KRKHFMLSVK MFYGNSDDIG VFLSKRIKVI
160 170 180 190 200
SKPSKKKQSL KNADLCIASG TKVALFNRLR SQTVSTRYLH VEGGNFHASS
210 220 230 240 250
QQWGAFFIHL LDDDESEGEE FTVRDGYIHY GQTVKLVCSV TGMALPRLII
260 270 280 290 300
RKVDKQTALL DADDPVSQLH KCAFYLKDTE RMYLCLSQER IIQFQATPCP
310 320 330 340 350
KEPNKEMIND GASWTIISTD KAEYTFYEGM GPVLAPVTPV PVVESLQLNG
360 370 380 390 400
GGDVAMLELT GQNFTPNLRV WFGDVEAETM YRCGESMLCV VPDISAFREG
410 420 430 440 450
WRWVRQPVQV PVTLVRNDGI IYSTSLTFTY TPEPGPRPHC SAAGAILRAN
460 470 480
SSQVPPNESN TNSEGSYTNA STNSTSVTSS TATVVS
Length:486
Mass (Da):54,427
Last modified:April 25, 2018 - v1
Checksum:i31FD3B3D01B13C4C
GO

Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2J8NVW7A0A2J8NVW7_PANTR
RBPJ isoform 12
RBPJ CK820_G0007571
500Annotation score:
H2R2Q6H2R2Q6_PANTR
RBPJ isoform 10
RBPJ CK820_G0007571
485Annotation score:
A0A2I3TEY3A0A2I3TEY3_PANTR
Recombination signal binding protei...
RBPJ
483Annotation score:
A0A2I3RF34A0A2I3RF34_PANTR
RBPJ isoform 9
RBPJ CK820_G0007571
382Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04033734 Genomic DNA No translation available.
AACZ04033735 Genomic DNA No translation available.
NBAG03000222 Genomic DNA Translation: PNI75901.1
NBAG03000222 Genomic DNA Translation: PNI75903.1
NBAG03000222 Genomic DNA Translation: PNI75904.1
RefSeqiXP_001166553.1, XM_001166553.4

Genome annotation databases

EnsembliENSPTRT00000089950; ENSPTRP00000086257; ENSPTRG00000015968
GeneIDi461152

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04033734 Genomic DNA No translation available.
AACZ04033735 Genomic DNA No translation available.
NBAG03000222 Genomic DNA Translation: PNI75901.1
NBAG03000222 Genomic DNA Translation: PNI75903.1
NBAG03000222 Genomic DNA Translation: PNI75904.1
RefSeqiXP_001166553.1, XM_001166553.4

3D structure databases

SMRiA0A2J8NVV9
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSPTRT00000089950; ENSPTRP00000086257; ENSPTRG00000015968
GeneIDi461152

Organism-specific databases

CTDi3516
VGNCiVGNC:675 RBPJ

Phylogenomic databases

GeneTreeiENSGT00390000005197

Family and domain databases

CDDicd01176 IPT_RBP-Jkappa, 1 hit
Gene3Di2.60.40.10, 1 hit
2.60.40.1450, 2 hits
InterProiView protein in InterPro
IPR015350 Beta-trefoil_DNA-bd_dom
IPR036358 BTD_sf
IPR013783 Ig-like_fold
IPR014756 Ig_E-set
IPR008967 p53-like_TF_DNA-bd
IPR015351 RBP-J/Cbf11/Cbf12_DNA-bd
IPR037095 RBP-J/Cbf11/Cbf12_DNA-bd_sf
IPR038007 RBP-Jkappa_IPT
PfamiView protein in Pfam
PF09270 BTD, 1 hit
PF09271 LAG1-DNAbind, 1 hit
SMARTiView protein in SMART
SM01268 BTD, 1 hit
SM01267 LAG1_DNAbind, 1 hit
SUPFAMiSSF110217 SSF110217, 1 hit
SSF49417 SSF49417, 1 hit
SSF81296 SSF81296, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2J8NVV9_PANTR
AccessioniPrimary (citable) accession number: A0A2J8NVV9
Secondary accession number(s): A0A2I3TAJ2
Entry historyiIntegrated into UniProtKB/TrEMBL: April 25, 2018
Last sequence update: April 25, 2018
Last modified: July 18, 2018
This is version 3 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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