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Protein
Submitted name:

HAVCR1 isoform 2

Gene

HAVCR1

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
HAVCR1 isoform 2Imported
Submitted name:
HAVCR1 isoform 3Imported
Submitted name:
Hepatitis A virus cellular receptor 1Imported
Gene namesi
Name:HAVCR1Imported
ORF Names:CK820_G0010178Imported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
Proteomesi
  • UP000002277 Componenti: Chromosome 5

Organism-specific databases

VGNCiVGNC:4030 HAVCR1

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei297 – 317HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_501508258921 – 365Sequence analysisAdd BLAST345

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 121Ig-likeInterPro annotationAdd BLAST119

Keywords - Domaini

Immunoglobulin domainSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00440000039800
KOiK20413
OMAiLWHNNQT

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR003006 Ig/MHC_CS
IPR003599 Ig_sub
IPR013106 Ig_V-set
PfamiView protein in Pfam
PF07686 V-set, 1 hit
SMARTiView protein in SMART
SM00409 IG, 1 hit
SUPFAMiSSF48726 SSF48726, 1 hit
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 1 hit
PS00290 IG_MHC, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

A0A2J8NK82-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MHPQVVILSL ILHLADSVAG SVKVGGEAGP SVTLPCHYSG AVTSMCWNRG
60 70 80 90 100
SCSLFTCQNG IVWTNGTHVT YRKDTRYKLL GDLARRDVSL TIENTAVSDS
110 120 130 140 150
GVYCCRVEHR GWFNDMKITV SLEIVPPKVT TTPIVTTVPT VMTVRTSTTV
160 170 180 190 200
PTTTTVPMTT TVPTTTVPTT MSIPTTTTVL TTMTVSTTTS VPTTTSIPTT
210 220 230 240 250
TSVPVTTTVS TFVPPMPLPR QNHEPVATSP SSPQPAETHP MTLQGAIRTE
260 270 280 290 300
PTSSSLYSYT TDGNDTVTES SDGLWNNNQT QLFPEHSLRT ANTTKGIYAG
310 320 330 340 350
VCISVLVLLA LLGAIIAKKY FFKKEVQQLS VSFSSLQIKA LQNAVEKEVQ
360
AEDNIYIENS LYATD
Length:365
Mass (Da):39,329
Last modified:April 25, 2018 - v1
Checksum:iEA6D2BB035B5D25F
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2J8NK72A0A2J8NK72_PANTR
HAVCR1 isoform 1
HAVCR1 CK820_G0010178
402Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04059069 Genomic DNA No translation available.
NBAG03000228 Genomic DNA Translation: PNI72169.1
NBAG03000228 Genomic DNA Translation: PNI72170.1
RefSeqiXP_016809598.1, XM_016954109.1
XP_016809599.1, XM_016954110.1
XP_016809600.1, XM_016954111.1

Genome annotation databases

EnsembliENSPTRT00000080504; ENSPTRP00000085869; ENSPTRG00000017459
GeneIDi462218
KEGGiptr:462218

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04059069 Genomic DNA No translation available.
NBAG03000228 Genomic DNA Translation: PNI72169.1
NBAG03000228 Genomic DNA Translation: PNI72170.1
RefSeqiXP_016809598.1, XM_016954109.1
XP_016809599.1, XM_016954110.1
XP_016809600.1, XM_016954111.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSPTRT00000080504; ENSPTRP00000085869; ENSPTRG00000017459
GeneIDi462218
KEGGiptr:462218

Organism-specific databases

CTDi26762
VGNCiVGNC:4030 HAVCR1

Phylogenomic databases

GeneTreeiENSGT00440000039800
KOiK20413
OMAiLWHNNQT

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR003006 Ig/MHC_CS
IPR003599 Ig_sub
IPR013106 Ig_V-set
PfamiView protein in Pfam
PF07686 V-set, 1 hit
SMARTiView protein in SMART
SM00409 IG, 1 hit
SUPFAMiSSF48726 SSF48726, 1 hit
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 1 hit
PS00290 IG_MHC, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2J8NK82_PANTR
AccessioniPrimary (citable) accession number: A0A2J8NK82
Secondary accession number(s): A0A2I3TAI1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 25, 2018
Last sequence update: April 25, 2018
Last modified: November 7, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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