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Protein
Submitted name:

chordin isoform X3

Gene

chrd

Organism
Austrofundulus limnaeus
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Keywordsi

Molecular functionDevelopmental proteinPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
chordin isoform X3Imported
Gene namesi
Name:chrdImported
OrganismiAustrofundulus limnaeusImported
Taxonomic identifieri52670 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeCyprinodontiformesRivulidaeAustrofundulus
Proteomesi
  • UP000192220 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini132 – 247CHRDInterPro annotationAdd BLAST116
Domaini249 – 370CHRDInterPro annotationAdd BLAST122
Domaini371 – 494CHRDInterPro annotationAdd BLAST124
Domaini500 – 627CHRDInterPro annotationAdd BLAST128
Domaini657 – 716VWFCInterPro annotationAdd BLAST60
Domaini735 – 804VWFCInterPro annotationAdd BLAST70

Family and domain databases

InterProiView protein in InterPro
IPR016353 Chordin
IPR010895 CHRD
IPR001007 VWF_dom
PfamiView protein in Pfam
PF07452 CHRD, 3 hits
PF00093 VWC, 3 hits
PIRSFiPIRSF002496 Chordin, 1 hit
SMARTiView protein in SMART
SM00754 CHRD, 4 hits
SM00214 VWC, 3 hits
PROSITEiView protein in PROSITE
PS50933 CHRD, 4 hits
PS01208 VWFC_1, 3 hits
PS50184 VWFC_2, 2 hits

Sequencei

Sequence statusi: Complete.

A0A2I4CME1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYSSDEPEEE PAPVLPPSCS IATVTWEIED IIEHALQTEP DPGTGPPNRK
60 70 80 90 100
SSHQPPAGLL QPLAIPKRPW SHISIDFVTG FPLSKGTNDK KQTDPLLESF
110 120 130 140 150
EYFTEKGKED DLHKSYNDRS YLSSEDTGVG ESRTDFVALL TGVTDSWLPS
160 170 180 190 200
SSGVARARLS LTRTSITFSI TYLRFGRPGK LVFLDSDGTT AFEFKVPKGQ
210 220 230 240 250
SDMICGVWKN VPKPLLRQLQ SEQMHISMTT STGKREEIQG KIIKHRALFA
260 270 280 290 300
ETFSSVLTSD EDNSGMGGIA MLTLSDSENN LHFILILQGL IRHKDKEPIL
310 320 330 340 350
VPIRVQLMYR QHVLREVRAN ITSNDPDFAE VLTDLNSREL FWLSRGQLEI
360 370 380 390 400
VVATEDQDPR QILGFITGRK SCDTIQSVMS SGDALTPGKT GGVGSAVFNL
410 420 430 440 450
NDNGTLEYQV QVAGLSSDVV GLTIELKPRR RNKRSVLYDL TPEFSQTSGQ
460 470 480 490 500
AVGSWSRLEA RHIHMLLQNE LFINVATAHS QEGELRGQIK ALPYSGLEVP
510 520 530 540 550
RQGLPTPLAG HFLSPPVRTG ASGHAWVSVD KQCHLHYEIV VAGLSKKEDV
560 570 580 590 600
TVNAHLHGLA EIGELDNSST THKRLLTGFY GSQAQGILKD LSLELLQHLD
610 620 630 640 650
QGTAFIQVST KLNPQGEIRG RVHVPNSCES GAGAEVEEAE LDDTLLTDPE
660 670 680 690 700
ELKKDPNTCF FENQHHAHGS RWTPNYDKCF TCSCQKRTVI CDPVICPVLT
710 720 730 740 750
CSRTIQPEDK CCPICDEKRE PKDMKAGEKV EEHPEGCYFE GDQKMHAPGI
760 770 780 790 800
SWHPFVPPFG YIKCAVCTCK GSSGEVHCEK VTCPVLVCSH PVRRNPSDCC
810 820 830 840 850
KECPEEERTP AGLRHTDMMQ ADGPRHCKFG KNYYQNSDSW HPWVPLVGEM
860 870 880 890 900
KCINCWCDHG VTKCQRKQCA VLTCSNITRT ENSCCPECAD RRSADTGKDQ
910
ILIYTSTKIP KSKMT
Length:915
Mass (Da):101,525
Last modified:February 28, 2018 - v1
Checksum:i6634C6CDDB8A644C
GO

Sequence databases

RefSeqiXP_013881148.1, XM_014025694.1

Genome annotation databases

GeneIDi106530122

Similar proteinsi

Entry informationi

Entry nameiA0A2I4CME1_9TELE
AccessioniPrimary (citable) accession number: A0A2I4CME1
Entry historyiIntegrated into UniProtKB/TrEMBL: February 28, 2018
Last sequence update: February 28, 2018
Last modified: May 23, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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