Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

tumor necrosis factor receptor superfamily member 16

Gene

ngfr

Organism
Austrofundulus limnaeus
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

Keywordsi

Molecular functionReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
tumor necrosis factor receptor superfamily member 16Imported
Gene namesi
Name:ngfrImported
OrganismiAustrofundulus limnaeusImported
Taxonomic identifieri52670 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeCyprinodontiformesRivulidaeAustrofundulus
Proteomesi
  • UP000192220 Componenti: Genome assembly

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei243 – 263HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 18Sequence analysisAdd BLAST18
ChainiPRO_501416728019 – 351Sequence analysisAdd BLAST333

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi41 ↔ 54PROSITE-ProRule annotation
Disulfide bondi83 ↔ 96PROSITE-ProRule annotation
Disulfide bondi86 ↔ 104PROSITE-ProRule annotation
Disulfide bondi122 ↔ 135PROSITE-ProRule annotation
Disulfide bondi125 ↔ 143PROSITE-ProRule annotation
Disulfide bondi146 ↔ 161PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bondPROSITE-ProRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini28 – 61TNFR-CysInterPro annotationAdd BLAST34
Repeati28 – 61TNFR-CysPROSITE-ProRule annotationAdd BLAST34
Domaini63 – 104TNFR-CysInterPro annotationAdd BLAST42
Repeati63 – 104TNFR-CysPROSITE-ProRule annotationAdd BLAST42
Domaini105 – 143TNFR-CysInterPro annotationAdd BLAST39
Repeati105 – 143TNFR-CysPROSITE-ProRule annotationAdd BLAST39
Domaini145 – 186TNFR-CysInterPro annotationAdd BLAST42
Repeati145 – 186TNFR-CysPROSITE-ProRule annotationAdd BLAST42

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

CDDicd13416 TNFRSF16, 1 hit
InterProiView protein in InterPro
IPR001368 TNFR/NGFR_Cys_rich_reg
IPR022325 TNFR_16
IPR034046 TNFRSF16_N
PfamiView protein in Pfam
PF00020 TNFR_c6, 3 hits
PRINTSiPR01966 TNFACTORR16
SMARTiView protein in SMART
SM00208 TNFR, 4 hits
PROSITEiView protein in PROSITE
PS00652 TNFR_NGFR_1, 1 hit
PS50050 TNFR_NGFR_2, 4 hits

Sequencei

Sequence statusi: Complete.

A0A2I4CC08-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTTLSLVVLC ALVTLGTASK TERALILDCD SGQYTTGGEC CVECSPGEGV
60 70 80 90 100
VKECGATQTV CAQCLDSETF SEHYSHTEKC MPCTECTGLM RMETPCTDSN
110 120 130 140 150
DAKCVCNYNY FYNKMSEQCE LCTVCPVGQG VFSHCEHDHD TVCEECVDET
160 170 180 190 200
FSDRESSLEP CLPCTICDEE TETEVAKCTP TTDSVCYNPN LPTYDPPISD
210 220 230 240 250
PLPSSDGDLF LDVSDSPLPS GETTTSSAGS PHFIGQGLNE NLIPIYCSIL
260 270 280 290 300
AAVVVGLVAY IMFKRWNSCK QNKQAANNRT ATNNQMVTPE GEKLHSDSGI
310 320 330 340 350
SVDTQSLQEQ QQQQQQAQAE VQPQPSRSHT QEQIVVSVDG SPQPDSPPPK

V
Length:351
Mass (Da):38,041
Last modified:February 28, 2018 - v1
Checksum:i1A607E085C6AA3DD
GO

Sequence databases

RefSeqiXP_013877522.1, XM_014022068.1

Genome annotation databases

GeneIDi106527237

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_013877522.1, XM_014022068.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi106527237

Organism-specific databases

CTDi4804

Family and domain databases

CDDicd13416 TNFRSF16, 1 hit
InterProiView protein in InterPro
IPR001368 TNFR/NGFR_Cys_rich_reg
IPR022325 TNFR_16
IPR034046 TNFRSF16_N
PfamiView protein in Pfam
PF00020 TNFR_c6, 3 hits
PRINTSiPR01966 TNFACTORR16
SMARTiView protein in SMART
SM00208 TNFR, 4 hits
PROSITEiView protein in PROSITE
PS00652 TNFR_NGFR_1, 1 hit
PS50050 TNFR_NGFR_2, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2I4CC08_9TELE
AccessioniPrimary (citable) accession number: A0A2I4CC08
Entry historyiIntegrated into UniProtKB/TrEMBL: February 28, 2018
Last sequence update: February 28, 2018
Last modified: May 23, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again