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Protein
Submitted name:

nephrocystin-3 isoform X3

Gene

nphp3

Organism
Austrofundulus limnaeus
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
nephrocystin-3 isoform X3Imported
Gene namesi
Name:nphp3Imported
OrganismiAustrofundulus limnaeusImported
Taxonomic identifieri52670 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeCyprinodontiformesRivulidaeAustrofundulus
Proteomesi
  • UP000192220 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini615 – 966TPR_REGIONInterPro annotationAdd BLAST352
Repeati615 – 648TPRPROSITE-ProRule annotationAdd BLAST34
Repeati657 – 690TPRPROSITE-ProRule annotationAdd BLAST34
Repeati699 – 732TPRPROSITE-ProRule annotationAdd BLAST34
Repeati765 – 798TPRPROSITE-ProRule annotationAdd BLAST34
Repeati807 – 840TPRPROSITE-ProRule annotationAdd BLAST34
Repeati849 – 882TPRPROSITE-ProRule annotationAdd BLAST34
Repeati891 – 924TPRPROSITE-ProRule annotationAdd BLAST34
Repeati933 – 966TPRPROSITE-ProRule annotationAdd BLAST34

Keywords - Domaini

TPR repeatPROSITE-ProRule annotation

Family and domain databases

Gene3Di1.25.40.10, 3 hits
InterProiView protein in InterPro
IPR027417 P-loop_NTPase
IPR013026 TPR-contain_dom
IPR011990 TPR-like_helical_dom_sf
IPR019734 TPR_repeat
PfamiView protein in Pfam
PF13176 TPR_7, 1 hit
SMARTiView protein in SMART
SM00028 TPR, 8 hits
SUPFAMiSSF48452 SSF48452, 2 hits
SSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS50005 TPR, 8 hits
PS50293 TPR_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

A0A2I4BM82-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MCECLGHFYL NVYFPEETAA SYITERKQEI EKSSVCVLLL KSTVTSSVIE
60 70 80 90 100
DCEEAFVRNL DGHSLVLYLR TEGDGGLTEP IRQLLEKVNT ADKAAKVKVV
110 120 130 140 150
DHSGLAEDGA NLIYTQLKKV IKQELLGFEG ADADSKDAVV DEGHEEDSGD
160 170 180 190 200
VLWDLHDEQE QIESYQQACN STASQLGFQK YIDRLNDMIA APPPTPPLLV
210 220 230 240 250
SGGPGSGKSL LLSKWVELQQ KQSPNSLFLY HFVGRPLSTS SEPVLIIKRL
260 270 280 290 300
TVKLLQHFWS LSGLTMDPSK TLEEFPRWLE RLSARHQGNI IIIIDSIDQI
310 320 330 340 350
HQAERHMKWL IDPLPVNVRV VVSVNVETCP QAWRLWPTLH LDPLSPREVK
360 370 380 390 400
SVVTAECQSM GLKLTKDQEK KLERHCRSAS TCNASYVTLL ARMIASDRCD
410 420 430 440 450
LSLEKSLEQC LLCQDSMSLY RLALNMTLRS LSTDTERRVM KEMLCLVFAS
460 470 480 490 500
HNGVSESEIL DFFPELELPV LSFLLHRLNR LCITTLRCGL VTFQHLQACE
510 520 530 540 550
AVRLEFLSGG SSSASYREKL IHYFSQQLSQ DRVTWRVADE LPWLLQQQEE
560 570 580 590 600
QTKLQLCLLN LFVSQNLYKR GHFSELLAYW QHVGKDKSSM ATEYFDSLKN
610 620 630 640 650
YEKSCESEED MTKLANLYET LGRFLKDLGL PSQAVAPLHR SLEIRETALD
660 670 680 690 700
PDHPSVARSL HQLAGVYVKW KKYGNAEQLY KQALEISENA FGAEHPSVAR
710 720 730 740 750
ELESLAVLYQ KQNKYEQAEK LKKRSVKIRQ KTARQKGHMY GFTLLRRRAL
760 770 780 790 800
QLEELTLGKD SADSAKTLNE LGVLYYLQNN LDAAKVFLTR SLEMRQRVFG
810 820 830 840 850
PDHPDCAQSL NNLAALHTER REYETAEDMY ERALEIRKKA LSPDHPSLAY
860 870 880 890 900
TLKHLAMLYK RRGKLEKAVP LYELSLEIRE KSFGPKHPSV ATALVNLAVI
910 920 930 940 950
YCQLKKHSEA LPLYERALKV YENSLGRSHP RVGETLKNLA VLSFERGDFE
960 970 980 990
RAAELYKRAM EIKEAEPSLV CGNAPSRHSS SGDTFSVKGP APLPHAPR
Length:998
Mass (Da):113,231
Last modified:February 28, 2018 - v1
Checksum:i3F686728CDF4B558
GO

Sequence databases

RefSeqiXP_013868833.1, XM_014013379.1

Genome annotation databases

GeneIDi106521006

Similar proteinsi

Entry informationi

Entry nameiA0A2I4BM82_9TELE
AccessioniPrimary (citable) accession number: A0A2I4BM82
Entry historyiIntegrated into UniProtKB/TrEMBL: February 28, 2018
Last sequence update: February 28, 2018
Last modified: May 23, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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