Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Homeobox protein cut-like

Gene

cux1

Organism
Austrofundulus limnaeus
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi1174 – 1233HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation
Biological processTranscription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Homeobox protein cut-likeUniRule annotation
Gene namesi
Name:cux1Imported
OrganismiAustrofundulus limnaeusImported
Taxonomic identifieri52670 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeCyprinodontiformesRivulidaeAustrofundulus
Proteomesi
  • UP000192220 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini623 – 710CUTInterPro annotationAdd BLAST88
Domaini888 – 976CUTInterPro annotationAdd BLAST89
Domaini1047 – 1134CUTInterPro annotationAdd BLAST88
Domaini1172 – 1232HomeoboxInterPro annotationAdd BLAST61

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili98 – 118Sequence analysisAdd BLAST21
Coiled coili149 – 207Sequence analysisAdd BLAST59
Coiled coili217 – 258Sequence analysisAdd BLAST42
Coiled coili267 – 304Sequence analysisAdd BLAST38
Coiled coili326 – 360Sequence analysisAdd BLAST35
Coiled coili365 – 385Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the CUT homeobox family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis, HomeoboxPROSITE-ProRule annotation

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR003350 CUT_dom
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR010982 Lambda_DNA-bd_dom_sf
PfamiView protein in Pfam
PF02376 CUT, 3 hits
PF00046 Homeobox, 1 hit
SMARTiView protein in SMART
SM01109 CUT, 3 hits
SM00389 HOX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
SSF47413 SSF47413, 3 hits
PROSITEiView protein in PROSITE
PS51042 CUT, 3 hits
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 7 potential isoforms that are computationally mapped.Show allAlign All

A0A2I4BFJ1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKVALSLADQ KLILFVQFNI DRTHCNKPGR RRGDAPKQKA TSGGGSGGKL
60 70 80 90 100
SKELDATATQ LANRQDESEQ SRKKLIDLSR EFKKTTPEDL RKQVAPLLKS
110 120 130 140 150
FQGEIDALSK RSKEAEAAFL NVYKKIIDVP DPVPVLELAQ QLQLKLQRMH
160 170 180 190 200
DIETENTKLR ETLEDYNKEF AEVKNQEVTI KALKEKIREY EQTLKNQAEN
210 220 230 240 250
LAQEKQLQLH NDYAEKERKL QESQDSMSSR LKEAETKVQS LQTALETTQA
260 270 280 290 300
ELFDLKTKYD EESTAKVDEI EMVMTDLERA NQRAEAAQRE AESLREQLSL
310 320 330 340 350
SNQSQQPSSP SKADPDSEQA AEAASHSSLE AELRAKERET AQLVEDVQRL
360 370 380 390 400
QASLTKLRET TSSQILQLEQ QLSSKSAVLK ELEEKLESQA DYEEVKKELS
410 420 430 440 450
ILKTMEFGTS DSVQDSSKPL EVLLLEKNRA LQSESAALRI ANTELSGSAG
460 470 480 490 500
RKGTEESTTT KEDTVNSDPS SSPTPPPPSV PSSSQLPLSR AHTDSLNTAT
510 520 530 540 550
TSGETHPFTP TGIGQELYSP MFPLVGGKMA LNSLIQRQLL QTFYSKALQE
560 570 580 590 600
SSGIHSGALL FTPFTPALSS IPTSTPGSGS ATIPLAASSP QPPPASPDMA
610 620 630 640 650
PVNGSSTAGS APSPSPSHSD ANTGSVLDGE DMDTAEIARQ VKEQLIKHNI
660 670 680 690 700
GQRVFGHYVL GLSQGSVSEI LARPKPWNKL TIRGKEPFHK MRQFLADEQN
710 720 730 740 750
ILALRSIQGR QRGNITARVR TPEAGSDEAI KSILEQAKRE LQVQKADLSH
760 770 780 790 800
APPSYTGLKG GGGGGVASGG GSGSDEAIRS ILEQARREME ANQAALEPIL
810 820 830 840 850
KASSSSSSSA LSQRDILNSP LTAPLPPYNP LALSLKKPPS SLLSSPSSPS
860 870 880 890 900
PILDFSSGGK REGRASSGID MSADGLFRQG RASEGSARSG SAAGVGYWRE
910 920 930 940 950
QWWSNMHSDP RRTMSSQTGE ENHHQEDSKE GILSDSLSRH KPWNKLNQRS
960 970 980 990 1000
REPYLRMQPW VNGDQGQNAH VQQTQNQAEG TPKTSASCSP APESPLSSAE
1010 1020 1030 1040 1050
ESVNGLSGDP LASQSSGLKP PSEDPSGGES QPGTPLPLPG HSGLSIQEMV
1060 1070 1080 1090 1100
AMSPELDTYA ITKKVKEVLT DNNLGQRLFG ETILGLTQGS VSDLLARPKP
1110 1120 1130 1140 1150
WHKLSLKGRE PFVRMQLWLQ DPHSVEKLMD MKRLEKKAYM KRRLSSLSDG
1160 1170 1180 1190 1200
HSVEGALVGS DYMQGSQSPG QQQLKKPRVV LGPEEKEALK KAYQQKPYPS
1210 1220 1230 1240 1250
PKTIEELASQ LNLKTSTVIN WFHNYRSRIR RELFIEEIQA AGGVVPGSDG
1260 1270 1280 1290 1300
GSPSLRGSKS GEGDSCDGTE SEGTVESRQG LGMSLEDHRG ACKDHSMETE
1310 1320 1330 1340 1350
SEVGGSNNSP AQLDCTTSGL AGPGSSCGQS GLGLFSLTEA SSSSSASSTN
1360 1370 1380 1390
IPASGPTRNP RDNNLRKKKA ANLNNIIHRL EKAASKEDPS EWEF
Length:1,394
Mass (Da):151,228
Last modified:February 28, 2018 - v1
Checksum:iDDB8FCA1AFAB3AF6
GO

Computationally mapped potential isoform sequencesi

There are 7 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2I4BFJ6A0A2I4BFJ6_9TELE
DNA-binding protein SATB
cux1
1,262Annotation score:
A0A2I4BFJ7A0A2I4BFJ7_9TELE
Homeobox protein cut-like
cux1
1,392Annotation score:
A0A2I4BFI4A0A2I4BFI4_9TELE
Homeobox protein cut-like
cux1
1,422Annotation score:
A0A2I4BFK3A0A2I4BFK3_9TELE
Homeobox protein cut-like
cux1
1,421Annotation score:
A0A2I4BFJ5A0A2I4BFJ5_9TELE
Homeobox protein cut-like
cux1
1,364Annotation score:
A0A2I4BFJ3A0A2I4BFJ3_9TELE
protein CASP isoform X6
cux1
700Annotation score:
A0A2I4BFK8A0A2I4BFK8_9TELE
protein CASP isoform X7
cux1
670Annotation score:

Sequence databases

RefSeqiXP_013866509.1, XM_014011055.1

Genome annotation databases

GeneIDi106519396

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_013866509.1, XM_014011055.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi106519396

Organism-specific databases

CTDi1523

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR003350 CUT_dom
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR010982 Lambda_DNA-bd_dom_sf
PfamiView protein in Pfam
PF02376 CUT, 3 hits
PF00046 Homeobox, 1 hit
SMARTiView protein in SMART
SM01109 CUT, 3 hits
SM00389 HOX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
SSF47413 SSF47413, 3 hits
PROSITEiView protein in PROSITE
PS51042 CUT, 3 hits
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2I4BFJ1_9TELE
AccessioniPrimary (citable) accession number: A0A2I4BFJ1
Entry historyiIntegrated into UniProtKB/TrEMBL: February 28, 2018
Last sequence update: February 28, 2018
Last modified: May 23, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again