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Protein
Submitted name:

CLIP-associating protein 2 isoform X12

Gene

clasp2

Organism
Austrofundulus limnaeus
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
CLIP-associating protein 2 isoform X12Imported
Gene namesi
Name:clasp2Imported
OrganismiAustrofundulus limnaeusImported
Taxonomic identifieri52670 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeCyprinodontiformesRivulidaeAustrofundulus
Proteomesi
  • UP000192220 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 233TOGInterPro annotationAdd BLAST226
Repeati169 – 207HEATPROSITE-ProRule annotationAdd BLAST39
Domaini329 – 562TOGInterPro annotationAdd BLAST234
Domaini924 – 1162TOGInterPro annotationAdd BLAST239
Domaini1302 – 1545TOGInterPro annotationAdd BLAST244

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1318 – 1349Sequence analysisAdd BLAST32

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Gene3Di1.25.10.10, 4 hits
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR024395 CLASP_N_dom
IPR021133 HEAT_type_2
IPR034085 TOG
PfamiView protein in Pfam
PF12348 CLASP_N, 2 hits
SMARTiView protein in SMART
SM01349 TOG, 4 hits
SUPFAMiSSF48371 SSF48371, 1 hit
PROSITEiView protein in PROSITE
PS50077 HEAT_REPEAT, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 32 potential isoforms that are computationally mapped.Show allAlign All

A0A2I4B0C1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEEHDNMDYF YQQVLQKDVT RRLQVGQDLI EYLNDPQRSP DVEQDKPRLD
60 70 80 90 100
KTVDELTGWV NSSNFKVALL GIDICGAFVD RLGDRFKGYL GTVLPALVDR
110 120 130 140 150
LGDAKDQVRE NSQALILRCM EQTASPMYVW ERLIPGFKHK NFRSREGICL
160 170 180 190 200
CLSTTLSTYG AQPLSLSKLV PHLCTLTGDQ NPQVREASIT TLVDVYRHVG
210 220 230 240 250
ERVRADLGKR GLPAARLQTI FARFDEALNS GNMALSPGHD RSFDEALNSG
260 270 280 290 300
NMALSPGHDR SFDDDDSVDG RSSASFKVPK VPKKPAESSA ARRPSATGSK
310 320 330 340 350
LVSKESAGAV DEEDFIKAFT DVPTVQIYSS RDLEDNLNKI REICSDDKHD
360 370 380 390 400
WDQRCNALKK IRSLLVADAA SYDCFYQHLR LLDGAFKLSA KDLRSQVVRE
410 420 430 440 450
ACITVAHLSS VLGNKFDHGA EAIVPVLFNL IPNCAKVMAT SGVSAIRIII
460 470 480 490 500
RHTHVPRLIP LITSNCTSKS VAVRRRCYDF LDLLLQEWHT HSLERHTTVL
510 520 530 540 550
VESIKKGIRD ADSEARVEAR KAYWGLRNHF PAEADALYNS LEPSYQRTLQ
560 570 580 590 600
SCLKSSGSVA SLPQSDRSSS SSQESLNRPL SSKWSAAPGR VPAPAKAGMS
610 620 630 640 650
PVSLQRSRSD VDVNAAAVAK HRHVGQARGT GRLPPGSYSS LDDASDKTDG
660 670 680 690 700
TRSDNGRVRT KQPFTTASSV SSQVDSRGRS RTKMVSQSQR SDESDCTPGS
710 720 730 740 750
QSANTVGAGS RSGSPGRVLT STALSTMSSG AHRVLAGPAG DGQRRSRIPR
760 770 780 790 800
SQGCSRDSSP TRLSVAPSSL SSNYNSASRG ARGSRIPRPS MSQGCSREAS
810 820 830 840 850
RESSRDTSPV RSFTPLATRS YSRSTGALHT PDAFGAAGSG FGISQSSRLS
860 870 880 890 900
SSVSAMRVLN TGSDVEEALA DALLLGDMRS KKKPARRRYE NYGNMYSDDD
910 920 930 940 950
ANSDASSVCS ERSCSSRNGG AISTYMRQTE DVAEVLNRCA SANWSERKEG
960 970 980 990 1000
LLGLQALLKN QRTLSRVELK RLCEIFSRMF ADPHSKRVFS MFLETLVDFI
1010 1020 1030 1040 1050
QVHRDDLQDW LFVLLTQLLK KMGADLLGSV QAKVQRALDV TRESFPNDLQ
1060 1070 1080 1090 1100
FTILMRFTVD QTQTHNLKVK VAILKYIETL TLQMDAPDFV NSSETRLAVS
1110 1120 1130 1140 1150
RIITWTTEPK SSDVRKAAQS VLISLFQLNT PEFTMLLAAL PKTFQDGATK
1160 1170 1180 1190 1200
LLQNHLKNTG NAAQAPIGSP LTRHTARSPA SWTSPVTSPT NTSQNTPSPS
1210 1220 1230 1240 1250
AFDYDMENMN SEDIYSSLKG VTEAIQNFSV RSQEDMNDPV QRREGEEGGS
1260 1270 1280 1290 1300
GMELVDGGRM ALDNKTSLLN TPLLSSSPRL AREHLSDSPF KHSRSKDASL
1310 1320 1330 1340 1350
DDSEQLGDES NLDQSELVAE LLKELSNHNE RVEERKAALC ELLKLIRENT
1360 1370 1380 1390 1400
LQVWDEHFKT ILLLLLETMG DSEHVIRTLA LRVLREILGK QPWRFKNYAE
1410 1420 1430 1440 1450
LTIMKTLEAH KDPHKEVVRA AEETAAMLAL SISPEQCIKV LCPIIQSADY
1460 1470 1480 1490 1500
PINLAAIKMQ TKVVERIPRE GLISMLPEIV PGLIQGYDNS ESSVRKACVF
1510 1520 1530 1540
CLVAIYAVIG EDLKPHLSQL SSSKLKLLNL YIKRAQSGSS GSDPSAEGL
Length:1,549
Mass (Da):170,485
Last modified:February 28, 2018 - v1
Checksum:iF1B3556B07E45DD2
GO

Computationally mapped potential isoform sequencesi

There are 32 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2I4B0B4A0A2I4B0B4_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,454Annotation score:
A0A2I4B0D8A0A2I4B0D8_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,466Annotation score:
A0A2I4B092A0A2I4B092_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,548Annotation score:
A0A2I4B0C9A0A2I4B0C9_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,437Annotation score:
A0A2I4B0A6A0A2I4B0A6_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,548Annotation score:
A0A2I4B085A0A2I4B085_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,560Annotation score:
A0A2I4B0B3A0A2I4B0B3_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,505Annotation score:
A0A2I4B098A0A2I4B098_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,561Annotation score:
A0A2I4B080A0A2I4B080_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,568Annotation score:
A0A2I4B0B9A0A2I4B0B9_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,482Annotation score:
There are more potential isoformsShow all

Sequence databases

RefSeqiXP_013861168.1, XM_014005714.1

Genome annotation databases

GeneIDi106515763

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_013861168.1, XM_014005714.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi106515763

Organism-specific databases

CTDi23122

Family and domain databases

Gene3Di1.25.10.10, 4 hits
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR024395 CLASP_N_dom
IPR021133 HEAT_type_2
IPR034085 TOG
PfamiView protein in Pfam
PF12348 CLASP_N, 2 hits
SMARTiView protein in SMART
SM01349 TOG, 4 hits
SUPFAMiSSF48371 SSF48371, 1 hit
PROSITEiView protein in PROSITE
PS50077 HEAT_REPEAT, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2I4B0C1_9TELE
AccessioniPrimary (citable) accession number: A0A2I4B0C1
Entry historyiIntegrated into UniProtKB/TrEMBL: February 28, 2018
Last sequence update: February 28, 2018
Last modified: November 7, 2018
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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