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Protein
Submitted name:

CLIP-associating protein 2 isoform X29

Gene

clasp2

Organism
Austrofundulus limnaeus
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
CLIP-associating protein 2 isoform X29Imported
Gene namesi
Name:clasp2Imported
OrganismiAustrofundulus limnaeusImported
Taxonomic identifieri52670 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeCyprinodontiformesRivulidaeAustrofundulus
Proteomesi
  • UP000192220 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 233TOGInterPro annotationAdd BLAST226
Repeati169 – 207HEATPROSITE-ProRule annotationAdd BLAST39
Domaini329 – 562TOGInterPro annotationAdd BLAST234
Domaini842 – 1080TOGInterPro annotationAdd BLAST239
Domaini1220 – 1463TOGInterPro annotationAdd BLAST244

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1236 – 1267Sequence analysisAdd BLAST32

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Gene3Di1.25.10.10, 4 hits
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR024395 CLASP_N_dom
IPR021133 HEAT_type_2
IPR034085 TOG
PfamiView protein in Pfam
PF12348 CLASP_N, 2 hits
SMARTiView protein in SMART
SM01349 TOG, 4 hits
SUPFAMiSSF48371 SSF48371, 1 hit
PROSITEiView protein in PROSITE
PS50077 HEAT_REPEAT, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 32 potential isoforms that are computationally mapped.Show allAlign All

A0A2I4B0A8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEEHDNMDYF YQQVLQKDVT RRLQVGQDLI EYLNDPQRSP DVEQDKPRLD
60 70 80 90 100
KTVDELTGWV NSSNFKVALL GIDICGAFVD RLGDRFKGYL GTVLPALVDR
110 120 130 140 150
LGDAKDQVRE NSQALILRCM EQTASPMYVW ERLIPGFKHK NFRSREGICL
160 170 180 190 200
CLSTTLSTYG AQPLSLSKLV PHLCTLTGDQ NPQVREASIT TLVDVYRHVG
210 220 230 240 250
ERVRADLGKR GLPAARLQTI FARFDEALNS GNMALSPGHD RSFDEALNSG
260 270 280 290 300
NMALSPGHDR SFDDDDSVDG RSSASFKVPK VPKKPAESSA ARRPSATGSK
310 320 330 340 350
LVSKESAGAV DEEDFIKAFT DVPTVQIYSS RDLEDNLNKI REICSDDKHD
360 370 380 390 400
WDQRCNALKK IRSLLVADAA SYDCFYQHLR LLDGAFKLSA KDLRSQVVRE
410 420 430 440 450
ACITVAHLSS VLGNKFDHGA EAIVPVLFNL IPNCAKVMAT SGVSAIRIII
460 470 480 490 500
RHTHVPRLIP LITSNCTSKS VAVRRRCYDF LDLLLQEWHT HSLERHTTVL
510 520 530 540 550
VESIKKGIRD ADSEARVEAR KAYWGLRNHF PAEADALYNS LEPSYQRTLQ
560 570 580 590 600
SCLKSSGSVA SLPQSDRSSS SSQESLNRPL SSKWSAAPGR VPAPAKAGMS
610 620 630 640 650
PVSLQRSRSD VDVNAAAVAK HRHVGQARGT GRLPPGSYSS LDDASDKTDG
660 670 680 690 700
TRSDNGRVRT KQPFTTASSV SSQVDSRGRS RTKMVSQSQR SQSANTVGAG
710 720 730 740 750
SRSGSPGRVL TSTALSTMSS GAHRVLAGPA GDGQRRSRIP RSQGCSRDSS
760 770 780 790 800
PTRLSVGSGF GISQSSRLSS SVSAMRVLNT GSDVEEALAD ALLLGDMRSK
810 820 830 840 850
KPARRRYENY GNMYSDDDAN SDASSVCSER SCSSRNGGAI STYMRQTEDV
860 870 880 890 900
AEVLNRCASA NWSERKEGLL GLQALLKNQR TLSRVELKRL CEIFSRMFAD
910 920 930 940 950
PHSKRVFSMF LETLVDFIQV HRDDLQDWLF VLLTQLLKKM GADLLGSVQA
960 970 980 990 1000
KVQRALDVTR ESFPNDLQFT ILMRFTVDQT QTHNLKVKVA ILKYIETLTL
1010 1020 1030 1040 1050
QMDAPDFVNS SETRLAVSRI ITWTTEPKSS DVRKAAQSVL ISLFQLNTPE
1060 1070 1080 1090 1100
FTMLLAALPK TFQDGATKLL QNHLKNTGNA AQAPIGSPLT RHTARSPASW
1110 1120 1130 1140 1150
TSPVTSPTNT SQNTPSPSAF DYDMENMNSE DIYSSLKGVT EAIQNFSVRS
1160 1170 1180 1190 1200
QEDMNDPVQR REGEEGGSGM ELVDGGRMAL DNKTSLLNTP LLSSSPRLAR
1210 1220 1230 1240 1250
EHLSDSPFKH SRSKDASLDD SEQLGDESNL DQSELVAELL KELSNHNERV
1260 1270 1280 1290 1300
EERKAALCEL LKLIRENTLQ VWDEHFKTIL LLLLETMGDS EHVIRTLALR
1310 1320 1330 1340 1350
VLREILGKQP WRFKNYAELT IMKTLEAHKD PHKEVVRAAE ETAAMLALSI
1360 1370 1380 1390 1400
SPEQCIKVLC PIIQSADYPI NLAAIKMQTK VVERIPREGL ISMLPEIVPG
1410 1420 1430 1440 1450
LIQGYDNSES SVRKACVFCL VAIYAVIGED LKPHLSQLSS SKLKLLNLYI
1460
KRAQSGSSGS DPSAEGL
Length:1,467
Mass (Da):161,934
Last modified:February 28, 2018 - v1
Checksum:iEBF604C73A59E81E
GO

Computationally mapped potential isoform sequencesi

There are 32 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2I4B0B4A0A2I4B0B4_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,454Annotation score:
A0A2I4B0D8A0A2I4B0D8_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,466Annotation score:
A0A2I4B092A0A2I4B092_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,548Annotation score:
A0A2I4B0C9A0A2I4B0C9_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,437Annotation score:
A0A2I4B0A6A0A2I4B0A6_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,548Annotation score:
A0A2I4B085A0A2I4B085_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,560Annotation score:
A0A2I4B0B3A0A2I4B0B3_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,505Annotation score:
A0A2I4B098A0A2I4B098_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,561Annotation score:
A0A2I4B080A0A2I4B080_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,568Annotation score:
A0A2I4B0B9A0A2I4B0B9_9TELE
CLIP-associating protein 2 isoform ...
clasp2
1,482Annotation score:
There are more potential isoformsShow all

Sequence databases

RefSeqiXP_013861187.1, XM_014005733.1

Genome annotation databases

GeneIDi106515763

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_013861187.1, XM_014005733.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi106515763

Organism-specific databases

CTDi23122

Family and domain databases

Gene3Di1.25.10.10, 4 hits
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR024395 CLASP_N_dom
IPR021133 HEAT_type_2
IPR034085 TOG
PfamiView protein in Pfam
PF12348 CLASP_N, 2 hits
SMARTiView protein in SMART
SM01349 TOG, 4 hits
SUPFAMiSSF48371 SSF48371, 1 hit
PROSITEiView protein in PROSITE
PS50077 HEAT_REPEAT, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2I4B0A8_9TELE
AccessioniPrimary (citable) accession number: A0A2I4B0A8
Entry historyiIntegrated into UniProtKB/TrEMBL: February 28, 2018
Last sequence update: February 28, 2018
Last modified: November 7, 2018
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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