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Protein
Submitted name:

BicC family RNA binding protein 1

Gene

BICC1

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
BicC family RNA binding protein 1Imported
Gene namesi
Name:BICC1Imported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
Proteomesi
  • UP000002277 Componenti: Chromosome 10

Organism-specific databases

VGNCiVGNC:11669 BICC1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini955 – 1018SAMInterPro annotationAdd BLAST64

Phylogenomic databases

GeneTreeiENSGT00900000140968

Family and domain databases

CDDicd09520 SAM_BICC1, 1 hit
Gene3Di3.30.1370.10, 2 hits
InterProiView protein in InterPro
IPR037974 BICC1_SAM_dom
IPR004087 KH_dom
IPR004088 KH_dom_type_1
IPR036612 KH_dom_type_1_sf
IPR001660 SAM
IPR013761 SAM/pointed_sf
PfamiView protein in Pfam
PF00013 KH_1, 2 hits
PF00536 SAM_1, 1 hit
SMARTiView protein in SMART
SM00322 KH, 3 hits
SM00454 SAM, 1 hit
SUPFAMiSSF47769 SSF47769, 1 hit
SSF54791 SSF54791, 3 hits
PROSITEiView protein in PROSITE
PS50105 SAM_DOMAIN, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

A0A2I3SDQ5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEARAARRAH SARALLAGGG AAAGPGPGPR PGVAGGVGGA RGWDAPGAQW
60 70 80 90 100
RRRRWRWRRR LQGDELAPRR WEPVEPGRRA EAAAQAERRR QREPERCAPT
110 120 130 140 150
MAAQGEPGYL AAQSDPGSNS ERSTDSPVPG SEDDLVAGAT LHSPEWSEER
160 170 180 190 200
FRVDRKKLEA MLQAAAEGKG RSGEDFFQKI MEETNTQIAW PSKLKIGAKS
210 220 230 240 250
KKDPHIKVSG KKEDVKEAKE MIMSVLDTKS NRVTLKMDVS HTEHSHVIGK
260 270 280 290 300
GGNNIKKVME ETGCHIHFPD SNRNNQAEKS NQELLPLVLM FELPIAGILQ
310 320 330 340 350
PVPDPNSPSI QHISQTYNIS VSFKQRSRMY GATVIVRGSQ NNTSAVKEGT
360 370 380 390 400
AMLLEHLAGS LASAIPVSTQ LDIAAQHHLF MMGRNGSNIK HIMQRTGAQI
410 420 430 440 450
HFPDPSNPQK KSTVYLQGTI ESVCLARQYL MGCLPLVLMF DMKEEIEVDP
460 470 480 490 500
QFIAQLMEQL DVFISIKPKP KQPSKSVIVK SVERNALNMY EARKCLLGLE
510 520 530 540 550
SSGVTIATSP SPASCPAGLA CPSLDILASA GLGLTGLGLL GPTTLSLNTS
560 570 580 590 600
TTPNSLLNAL NSSVSPLQSP SSGTPSPTLW APPLANTSSA TGFSAIPHLM
610 620 630 640 650
IPSTAQATLT NILLSGVPTY GHTAPSPPPG LTPVDVHINS MQTEGKKISA
660 670 680 690 700
ALNGHAQSPN IKYGAISTSS LGEKVLSANH GDPSIQTSGS EQTSPKSSPT
710 720 730 740 750
EGCNDAFVEV GMPRSPSHSG NAGDLKQMMC PSKVSCAKRQ TVELLQGTKN
760 770 780 790 800
SHLHSTDRLL SDPELSATES PLADKKAPGS ERAAERAAAA QQNSERAHLA
810 820 830 840 850
PRSSYVNMQA FDYEQKKLLA TKAMLKKPVV TEVRTPTNTW SGLGFSKSMP
860 870 880 890 900
AETIKELRRA NHVSYKPTMT TTYEGSSMSL SRSNSREHLG SGSESDNWRD
910 920 930 940 950
RNGIGPGSHS EFAASIGSPK RKQNKSTEHY LSSSNYMDCI SSLTGSNGCN
960 970 980 990 1000
LNSSFKGSDL PELFSKLGLG KYTDVFQQQE IDLQTFLTLT DQDLKELGIT
1010 1020 1030 1040 1050
TFGARRKMLL AISELNKNRR KLFESPNART SFLEGGASGR LPRQYHSDIA

SVSGRW
Length:1,056
Mass (Da):113,953
Last modified:February 28, 2018 - v1
Checksum:i5501F00DE1D3E9ED
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2I3SD72A0A2I3SD72_PANTR
BicC family RNA binding protein 1
BICC1
1,074Annotation score:
H2Q1X7H2Q1X7_PANTR
BicC family RNA binding protein 1
BICC1
932Annotation score:
A0A2I3RGG6A0A2I3RGG6_PANTR
BicC family RNA binding protein 1
BICC1
1,049Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04022683 Genomic DNA No translation available.
AACZ04022684 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSPTRT00000092318; ENSPTRP00000075106; ENSPTRG00000002520

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04022683 Genomic DNA No translation available.
AACZ04022684 Genomic DNA No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSPTRT00000092318; ENSPTRP00000075106; ENSPTRG00000002520

Organism-specific databases

VGNCiVGNC:11669 BICC1

Phylogenomic databases

GeneTreeiENSGT00900000140968

Family and domain databases

CDDicd09520 SAM_BICC1, 1 hit
Gene3Di3.30.1370.10, 2 hits
InterProiView protein in InterPro
IPR037974 BICC1_SAM_dom
IPR004087 KH_dom
IPR004088 KH_dom_type_1
IPR036612 KH_dom_type_1_sf
IPR001660 SAM
IPR013761 SAM/pointed_sf
PfamiView protein in Pfam
PF00013 KH_1, 2 hits
PF00536 SAM_1, 1 hit
SMARTiView protein in SMART
SM00322 KH, 3 hits
SM00454 SAM, 1 hit
SUPFAMiSSF47769 SSF47769, 1 hit
SSF54791 SSF54791, 3 hits
PROSITEiView protein in PROSITE
PS50105 SAM_DOMAIN, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2I3SDQ5_PANTR
AccessioniPrimary (citable) accession number: A0A2I3SDQ5
Entry historyiIntegrated into UniProtKB/TrEMBL: February 28, 2018
Last sequence update: February 28, 2018
Last modified: April 25, 2018
This is version 3 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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