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Protein
Submitted name:

KCNT1 isoform 6

Gene

KCNT1

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
KCNT1 isoform 6Imported
Submitted name:
Potassium sodium-activated channel subfamily T member 1Imported
Gene namesi
Name:KCNT1Imported
ORF Names:CK820_G0012042Imported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
Proteomesi
  • UP000002277 Componenti: Chromosome 9

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei98 – 117HelicalSequence analysisAdd BLAST20
Transmembranei155 – 176HelicalSequence analysisAdd BLAST22
Transmembranei252 – 273HelicalSequence analysisAdd BLAST22
Transmembranei279 – 298HelicalSequence analysisAdd BLAST20
Transmembranei310 – 335HelicalSequence analysisAdd BLAST26

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini259 – 327Ion_trans_2InterPro annotationAdd BLAST69

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00530000063026

Family and domain databases

InterProiView protein in InterPro
IPR003929 K_chnl_BK_asu
IPR013099 K_chnl_dom
PfamiView protein in Pfam
PF03493 BK_channel_a, 1 hit
PF07885 Ion_trans_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 8 potential isoforms that are computationally mapped.Show allAlign All

A0A2I3RLP1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MARAKLPRSP SEGKAGPGGA PAGAAAPEEP HGLSPLLPAR GGGSVGSDVG
60 70 80 90 100
QRLPVEDFSL DSSLSQVQVE FYVNENTFKE RLKLFFIKNQ RSSLRIRLFN
110 120 130 140 150
FSLKLLTCLL YIVRVLLDDP ALGIGCWGCP KQNYSFNDSS SEINWAPILW
160 170 180 190 200
VERKMTLWAI QVIVAIISFL ETMLLIYLSY KGNIWEQIFR VSFVLEMINT
210 220 230 240 250
LPFIITIFWP PLRNLFIPVF LNCWLAKHAL ENMINDFHRA ILRTQSAMFN
260 270 280 290 300
QVLILFCTLL CLVFTGTCGI QHLERAGENL SLLTSFYFCI VTFSTVGYGD
310 320 330 340 350
VTPKIWPSQL LVVIMICVAL VVLPLQFEEL VYLWMERQKS GGNYSRHRAQ
360 370 380 390 400
TEKHVVLCVS SLKIDLLMDF LNEFYAHPRL QDYYVVILCP TEMDVQVRRV
410 420 430 440 450
LQIPLWSQRV IYLQGSALKD QDLMRAKMDN GEACFILSSR NEVDRTAADH
460 470 480 490 500
QTILRAWAVK DFAPNCPLYV QILKPENKFH VKFADHVVCE EECKYAMLAL
510 520 530 540 550
NCICPATSTL ITLLVHTSRG QEGQESPEQW QRMYGRCSGN EVYHIRMGDS
560 570 580 590 600
KFFREYEGKS FTYAAFHAHK KYGVCLIGLK REDNKSILLN PGPRHILAAS
610 620 630 640 650
DTCFYINITK EENSAFIFKQ EEKRKKRAFS GQGLHEGPAR LPVHSIIASM
660 670 680 690 700
GTVAMDLQGT EHRPTQSGGG GGGSKLALPT ENGSGSRRPS IAPVLELADS
710 720 730 740 750
SALLPCDLLS DQSEDEVTPS DDEGLSVVEY VKGYPPNSPY IGSSPTLCHL
760 770 780 790 800
LPVKAPFCCL RLDKGCKHNS YEDAKAYGFK NKLIIVSAET AGNGLYNFIV
810 820 830 840 850
PLRAYYRSRK ELNPIVLLLD NKPDHHFLEA ICCFPMVYYM EGSVDNLDSL
860 870 880 890 900
LQCGIIYADN LVVVDKESTM SAEEDYMADA KTIVNVQTMF RLFPSLSITT
910 920 930 940 950
ELTHPSNMRF MQFRAKDSYS LALSKLEKRE RENGSNLAFM FRLPFAAGRV
960 970 980 990 1000
FSISMLDTLL YQSFVKDYMI TITRLLLGLD TTPGSGYLCA MKITEGDLWI
1010 1020 1030 1040 1050
RTYGRLFQKL CSSSAEIPIG IYRTESHVFS TSEPHDLRAQ SQISVNVEDC
1060 1070 1080 1090 1100
EDTREVKGPW GSRAGTGGSS QGRHTGGGDP TEHPLLRRKS LQWARRLSRK
1110 1120 1130 1140 1150
APKQAGRAAA TEWISQQRLS LYRRSERQEL SELVKNRMKH LGLPTTGYED
1160 1170 1180 1190 1200
VANLTASDVM NRVNLGYLQD EMNDHQNTLS YVLINPPPDT RLEPSDIVYL
1210 1220 1230
IRSDPLAHVA SSSQSRKSSC SHKLSSCNPE TRDETQL
Length:1,237
Mass (Da):139,221
Last modified:February 28, 2018 - v1
Checksum:iC279E2836F3DBCEF
GO

Computationally mapped potential isoform sequencesi

There are 8 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2I3TUF5A0A2I3TUF5_PANTR
KCNT1 isoform 1
KCNT1 CK820_G0012042
1,211Annotation score:
A0A2I3T7F0A0A2I3T7F0_PANTR
KCNT1 isoform 8
KCNT1 CK820_G0012042
1,230Annotation score:
A0A2I3RII8A0A2I3RII8_PANTR
KCNT1 isoform 11
KCNT1 CK820_G0012042
1,217Annotation score:
A0A2I3TBZ1A0A2I3TBZ1_PANTR
KCNT1 isoform 2
KCNT1 CK820_G0012042
1,223Annotation score:
A0A2I3T3B9A0A2I3T3B9_PANTR
KCNT1 isoform 10
KCNT1 CK820_G0012042
1,256Annotation score:
A0A2I3S2J6A0A2I3S2J6_PANTR
KCNT1 isoform 5
KCNT1 CK820_G0012042
1,235Annotation score:
A0A2I3T1Q8A0A2I3T1Q8_PANTR
Uncharacterized protein
KCNT1
477Annotation score:
A0A2I3SN13A0A2I3SN13_PANTR
Uncharacterized protein
KCNT1
705Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04057952 Genomic DNA No translation available.
NBAG03000232 Genomic DNA Translation: PNI68602.1

Genome annotation databases

EnsembliENSPTRT00000086445; ENSPTRP00000065620; ENSPTRG00000050307

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04057952 Genomic DNA No translation available.
NBAG03000232 Genomic DNA Translation: PNI68602.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSPTRT00000086445; ENSPTRP00000065620; ENSPTRG00000050307

Phylogenomic databases

GeneTreeiENSGT00530000063026

Family and domain databases

InterProiView protein in InterPro
IPR003929 K_chnl_BK_asu
IPR013099 K_chnl_dom
PfamiView protein in Pfam
PF03493 BK_channel_a, 1 hit
PF07885 Ion_trans_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2I3RLP1_PANTR
AccessioniPrimary (citable) accession number: A0A2I3RLP1
Secondary accession number(s): A0A2J8N9Z9
Entry historyiIntegrated into UniProtKB/TrEMBL: February 28, 2018
Last sequence update: February 28, 2018
Last modified: May 23, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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