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Protein
Submitted name:

Synemin

Gene

SYNM

Organism
Nomascus leucogenys (Northern white-cheeked gibbon) (Hylobates leucogenys)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
SyneminImported
Gene namesi
Name:SYNMImported
OrganismiNomascus leucogenys (Northern white-cheeked gibbon) (Hylobates leucogenys)Imported
Taxonomic identifieri61853 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHylobatidaeNomascus
Proteomesi
  • UP000001073 Componenti: Chromosome 6

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Intermediate filamentPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 325IF rodInterPro annotationAdd BLAST315

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili15 – 49Sequence analysisAdd BLAST35
Coiled coili78 – 108Sequence analysisAdd BLAST31
Coiled coili120 – 140Sequence analysisAdd BLAST21
Coiled coili195 – 264Sequence analysisAdd BLAST70

Sequence similaritiesi

Belongs to the intermediate filament family.PROSITE-ProRule annotationSAAS annotation

Keywords - Domaini

Coiled coilPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00730000110953
KOiK10376

Family and domain databases

InterProiView protein in InterPro
IPR001664 IF
IPR018039 IF_conserved
IPR039008 IF_rod_dom
IPR030634 SYNM
PANTHERiPTHR23239 PTHR23239, 1 hit
PTHR23239:SF194 PTHR23239:SF194, 1 hit
PfamiView protein in Pfam
PF00038 Filament, 1 hit
SMARTiView protein in SMART
SM01391 Filament, 1 hit
PROSITEiView protein in PROSITE
PS00226 IF_ROD_1, 1 hit
PS51842 IF_ROD_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A2I3GCV4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSWRLQTGP EKAELQELNA RLYDYVCRVR ELERENLLLE EELRGRRGRE
60 70 80 90 100
GLWAEGQARC AEEARSLRQQ LDELSWATAL AEGERDALRR ELRELQRLDA
110 120 130 140 150
EERAARGRLD AELGAQQREL QEALGARAAL EAMLGRLEAE RRRLDAGHER
160 170 180 190 200
DVRELRARAA SLTIMSMHFR ARATGPAAPP PRLREVHDSY ALLVAESWRE
210 220 230 240 250
TVQLYEDEVR ELEEALRFGQ ESRLQAEEET RLCAQEAEAL RREALGLEQL
260 270 280 290 300
RARLEDELLR MREAYWLQAE ERQRAIDCLE DEKATLTLAM ADWLRDYQDL
310 320 330 340 350
LQVKTGLSLE VATYRALLEG ESNPEIVIWT EHIENMPPEF RHKSYHYTDS
360 370 380 390 400
LLQRENERNL FSRQKAPLAS LNHSSALYSN LSGHRGSQTG TSIGGDARRG
410 420 430 440 450
FLGSGYSSSA TTQQENSYGK TVNSQTNVRT FSPTYGLLRN TEAQVKTFPD
460 470 480 490 500
RPKAGDTREA PVYIPEDSTI ARESYWDRRD NVAAGASEST GSRERTVILG
510 520 530 540 550
KKTEVKATRE QERIRPETIR TKPEEKMFDS KEKASEERNL RWEELTKLDK
560 570 580 590 600
EARQRESQQM KEKAKEKDSP KEKSVREREV PISLEVSQDR RAEVSPKGLQ
610 620 630 640 650
TPVKDAGGGT GREAEARELR FRLGTSDATG SLQGDSMTET VAENIVTSIL
660 670 680 690 700
KQFTQSPETE ASADSFPDTK VTYVDRKELP GERKTKTEIV VESKLTEDVD
710 720 730 740 750
VSDDAGLDYL LSKDIKDVGL KGKSADQMIG DIINLGLKGR EGRAKVVNVE
760 770 780 790 800
IVEEPVSYVS GEKPEEFSVP FKVEEVEDVS PGSWGLVKEE EGYGESDVTF
810 820 830 840 850
SVNQHQRTKQ PQENTTHVEE VTEAGDSEGE QSYFVSTPDE YPGGHDRDDG
860 870 880 890 900
SVYGQIHIEE ESTIRYSWQD EIVQGTRRRT QKDGAVGEKV VKPLDVPAPS
910 920 930 940 950
LEGDLGSTHW KEQARSGEFH AEPTVIEKEI KIPHEFHTSM KGISSKEPRQ
960 970 980 990 1000
QLVEVIGQLE ETLPEHMREE LSALTREGQG GPGSVSVDVK KVQGAGGGSV
1010 1020 1030 1040 1050
TLVAEVNVSQ TVDADRLDLE ELSKDEASEM EKAVESVVRE SLSRQRSPAP
1060 1070 1080 1090 1100
GRPDEEDGAE ALAAGVRFRR WATRELYIPS GESEVAGGAS RSSGQRTPQG
1110 1120 1130 1140 1150
PVLATVEVSS PTGFAQSQVL EDVSQAARHI KLGPSEVWRT ERMSYEGPTA
1160 1170 1180 1190 1200
EVVEMDVSNV EAIRSRTQEA GARGVSDRGA WRDADSSNDQ AVGVSFKASA
1210 1220 1230 1240 1250
GEGDQAHGDQ GKEQAMFDKK VQLQRMVDQR SVISDEKKVA LLYLDNEEEE

NDGHWF
Length:1,256
Mass (Da):140,676
Last modified:February 28, 2018 - v1
Checksum:i0CC9D19BCB4FE649
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ADFV01101700 Genomic DNA No translation available.
ADFV01101701 Genomic DNA No translation available.
ADFV01101702 Genomic DNA No translation available.
RefSeqiXP_003277585.2, XM_003277537.3

Genome annotation databases

EnsembliENSNLET00000046084; ENSNLEP00000029113; ENSNLEG00000000835
GeneIDi100587905
KEGGinle:100587905

Similar proteinsi

Entry informationi

Entry nameiA0A2I3GCV4_NOMLE
AccessioniPrimary (citable) accession number: A0A2I3GCV4
Entry historyiIntegrated into UniProtKB/TrEMBL: February 28, 2018
Last sequence update: February 28, 2018
Last modified: June 20, 2018
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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