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Protein
Submitted name:

TNF receptor superfamily member 6b

Gene

TNFRSF6B

Organism
Nomascus leucogenys (Northern white-cheeked gibbon) (Hylobates leucogenys)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
TNF receptor superfamily member 6bImported
Gene namesi
Name:TNFRSF6BImported
OrganismiNomascus leucogenys (Northern white-cheeked gibbon) (Hylobates leucogenys)Imported
Taxonomic identifieri61853 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHylobatidaeNomascus
Proteomesi
  • UP000001073 Componenti: Chromosome 13

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 29Sequence analysisAdd BLAST29
ChainiPRO_501414078930 – 300Sequence analysisAdd BLAST271

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi73 ↔ 88PROSITE-ProRule annotation
Disulfide bondi95 ↔ 113PROSITE-ProRule annotation
Disulfide bondi153 ↔ 168PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bondPROSITE-ProRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini72 – 113TNFR-CysInterPro annotationAdd BLAST42
Repeati72 – 113TNFR-CysPROSITE-ProRule annotationAdd BLAST42
Domaini152 – 193TNFR-CysInterPro annotationAdd BLAST42
Repeati152 – 193TNFR-CysPROSITE-ProRule annotationAdd BLAST42

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

GeneTreeiENSGT00760000119204

Family and domain databases

CDDicd10575 TNFRSF6B, 1 hit
InterProiView protein in InterPro
IPR001368 TNFR/NGFR_Cys_rich_reg
IPR034023 TNFRSF6B_N
PfamiView protein in Pfam
PF00020 TNFR_c6, 3 hits
SMARTiView protein in SMART
SM00208 TNFR, 4 hits
PROSITEiView protein in PROSITE
PS50050 TNFR_NGFR_2, 2 hits

Sequencei

Sequence statusi: Complete.

A0A2I3GAG0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRALEGPGLS LLCLMSVLPA LLLVPAIHGV AEAPTYPWRD AETGEWLVCA
60 70 80 90 100
QCPPGTFVQR PCRRDSPTTC GPCPPRHYTQ FWNYLERCRY CNVLCGEREE
110 120 130 140 150
EARACHATHN RACRCRAGFF AHAGFCLEHA SCPPGTGVIA PGTPSQNTQC
160 170 180 190 200
QPCPPGTFSA SSSSSEQCQP HRNCTALGLA LNVPGSSSHD TLCTSCTGFP
210 220 230 240 250
LSTRVPGAEE CERAVIDFVA FQDISIKRLQ RLLQALEAPE GWGPTPRAGR
260 270 280 290 300
AALRLKLRRR LTELLEARDG ALLARLLQAL RVARMPGLER SVRERFLPVH
Length:300
Mass (Da):32,825
Last modified:February 28, 2018 - v1
Checksum:i032F8ABA82423133
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ADFV01122608 Genomic DNA No translation available.
RefSeqiXP_012367213.1, XM_012511759.1

Genome annotation databases

EnsembliENSNLET00000045270; ENSNLEP00000028301; ENSNLEG00000030355
GeneIDi100590724

Similar proteinsi

Entry informationi

Entry nameiA0A2I3GAG0_NOMLE
AccessioniPrimary (citable) accession number: A0A2I3GAG0
Entry historyiIntegrated into UniProtKB/TrEMBL: February 28, 2018
Last sequence update: February 28, 2018
Last modified: May 23, 2018
This is version 3 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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