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Protein
Submitted name:

Transmembrane and coiled-coil domains 3

Gene

TMCO3

Organism
Columba livia (Rock dove)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Transmembrane and coiled-coil domains 3Imported
Gene namesi
Name:TMCO3Imported
ORF Names:A306_00003066Imported
OrganismiColumba livia (Rock dove)Imported
Taxonomic identifieri8932 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeColumbiformesColumbidaeColumba
Proteomesi
  • UP000053872 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei292 – 312HelicalSequence analysisAdd BLAST21
Transmembranei324 – 341HelicalSequence analysisAdd BLAST18
Transmembranei353 – 374HelicalSequence analysisAdd BLAST22
Transmembranei429 – 451HelicalSequence analysisAdd BLAST23
Transmembranei457 – 479HelicalSequence analysisAdd BLAST23
Transmembranei500 – 519HelicalSequence analysisAdd BLAST20
Transmembranei555 – 575HelicalSequence analysisAdd BLAST21
Transmembranei580 – 603HelicalSequence analysisAdd BLAST24
Transmembranei642 – 661HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_501411528621 – 678Sequence analysisAdd BLAST658

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini275 – 660Na_H_ExchangerInterPro annotationAdd BLAST386

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili126 – 160Sequence analysisAdd BLAST35
Coiled coili178 – 205Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Gene3Di1.20.1530.20, 1 hit
InterProiView protein in InterPro
IPR006153 Cation/H_exchanger
IPR038770 Na+/solute_symporter_sf
PfamiView protein in Pfam
PF00999 Na_H_Exchanger, 1 hit

Sequencei

Sequence statusi: Complete.

A0A2I0MSV2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKATGFISLW TLVSLPCGHL ANPAEHEDVV KHAIKLHRGK GAVITQRKQW
60 70 80 90 100
VLESCRKLSG LLRQKNVVLN KLKSAIRAVE KDAGLSDEEK LFQVHTFEIF
110 120 130 140 150
QKELNESENS VFQAIHGLQR ALQGDYKDVV NMKESSRQRL EALREAAIKE
160 170 180 190 200
EMEYVELLAA EKHQVEALKN MQHQNKSLSI LDEILEDVRK AADRLEEEIE
210 220 230 240 250
EHAFDDNKSV RGVNFEAVLR VEEDEANSKR NASKREVEDD LGLSMLIDSQ
260 270 280 290 300
NNQYILTKPR DSTIPRADHH FIKDIVTIGM LSLPCGWLCT TIGLPTMFGY
310 320 330 340 350
IICGVLLGPS GLNSIKSIVQ VETLGEFGVF FTLFLVGLEF SPERLRKVWK
360 370 380 390 400
ISVQGPCYMT VLMIAFGLLW GHLLQIRPTQ SVFISTCLSL SSTPLVSRFL
410 420 430 440 450
AGSVRGDKEG DIDYSSVLLG MLVMQDVQLG LFIAVMPTLI QAGVSTYSSI
460 470 480 490 500
FKEILRILIL IGQILFSLAA VFLICLVIKT YLIGPYYRKL HAESKGNKEI
510 520 530 540 550
LILGITAFIF LMLTITELLD VSMELGCFLA GALISSQGHM VTEEIMSCIE
560 570 580 590 600
PIRDFLAIIF FASIGLHVFP TFVIYELTVL LFLTLSVVIM KFVLAVLVLS
610 620 630 640 650
VILPKTSQYI KWIVSAGLAQ VSEFSFVLGS RARRAGIISR EVYLLILSVT
660 670
TLSLLLAPAL WRAAIMKCVP RPERRSST
Length:678
Mass (Da):75,807
Last modified:February 28, 2018 - v1
Checksum:i854E7FAAE0F0C2C8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AKCR02000003 Genomic DNA Translation: PKK32755.1
RefSeqiXP_005505484.1, XM_005505427.1

Genome annotation databases

GeneIDi102091256
KEGGiclv:102091256

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AKCR02000003 Genomic DNA Translation: PKK32755.1
RefSeqiXP_005505484.1, XM_005505427.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi102091256
KEGGiclv:102091256

Organism-specific databases

CTDi55002

Family and domain databases

Gene3Di1.20.1530.20, 1 hit
InterProiView protein in InterPro
IPR006153 Cation/H_exchanger
IPR038770 Na+/solute_symporter_sf
PfamiView protein in Pfam
PF00999 Na_H_Exchanger, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2I0MSV2_COLLI
AccessioniPrimary (citable) accession number: A0A2I0MSV2
Entry historyiIntegrated into UniProtKB/TrEMBL: February 28, 2018
Last sequence update: February 28, 2018
Last modified: June 20, 2018
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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