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Protein
Submitted name:

Myocyte enhancer factor 2C, transcript variant X1

Gene

MEF2C

Organism
Columba livia (Rock dove)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Myocyte enhancer factor 2C, transcript variant X1Imported
Submitted name:
Myocyte enhancer factor 2C, transcript variant X2Imported
Submitted name:
Myocyte enhancer factor 2C, transcript variant X3Imported
Submitted name:
Myocyte enhancer factor 2C, transcript variant X4Imported
Gene namesi
Name:MEF2CImported
ORF Names:A306_00011704Imported
OrganismiColumba livia (Rock dove)Imported
Taxonomic identifieri8932 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeColumbiformesColumbidaeColumba
Proteomesi
  • UP000053872 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 61MADS-boxInterPro annotationAdd BLAST61

Phylogenomic databases

KOiK04454

Family and domain databases

CDDicd00265 MADS_MEF2_like, 1 hit
Gene3Di3.40.1810.10, 1 hit
InterProiView protein in InterPro
IPR022102 HJURP_C
IPR033896 MADS_MEF2-like
IPR002100 TF_MADSbox
IPR036879 TF_MADSbox_sf
PfamiView protein in Pfam
PF12347 HJURP_C, 1 hit
PF00319 SRF-TF, 1 hit
PRINTSiPR00404 MADSDOMAIN
SMARTiView protein in SMART
SM00432 MADS, 1 hit
SUPFAMiSSF55455 SSF55455, 1 hit
PROSITEiView protein in PROSITE
PS00350 MADS_BOX_1, 1 hit
PS50066 MADS_BOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A2I0LZE8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRKKIQITR IMDERNRQVT FTKRKFGLMK KAYELSVLCD CEIALIIFNS
60 70 80 90 100
TNKLFQYAST DMDKVLLKYT EYNEPHESRT NSDIVETLRK KGLNGCDSPD
110 120 130 140 150
PDADDSVGHS PESEDKYRKI NEDIDLMISR QRLCAVPPPN FEMPVSIPVS
160 170 180 190 200
NHNSLVYSNP VSSLGNPNLL PLAHPSLQRN SMSPGVTHRP PSAGNTGGLM
210 220 230 240 250
GGDLTTGAGT SAGNGYGNPR NSPGLLVSPG NLNKNMQAKS PPPMNLGMNN
260 270 280 290 300
RKPDLRVLIP PGSKNTMPSV NQRINNSQSA QSLATPVVSV ATPTLPGQGM
310 320 330 340 350
GGYPSAISTT YGTEYSLSSA DISSLSGFNT ASALHLGSVT GWQQQHLHNM
360 370 380 390 400
PPSALSQLGA CTSTHLSQST NLSLPSTQSL NIKSEPVSPP RDRTTTPSRY
410 420 430 440 450
PQHTRHEAGR SPVDSLSSCS SSYDGSDRED HRNEFHSPIG LTRPSPDERE
460
SPSVKRMRLS EGWAT
Length:465
Mass (Da):50,391
Last modified:February 28, 2018 - v1
Checksum:i43A9AE6981B67419
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AKCR02000058 Genomic DNA Translation: PKK22789.1
AKCR02000058 Genomic DNA Translation: PKK22790.1
AKCR02000058 Genomic DNA Translation: PKK22795.1
AKCR02000058 Genomic DNA Translation: PKK22796.1
RefSeqiXP_005505059.1, XM_005505002.2
XP_013223292.1, XM_013367838.1
XP_013223293.1, XM_013367839.1
XP_013223294.1, XM_013367840.1

Genome annotation databases

GeneIDi102090045
KEGGiclv:102090045

Similar proteinsi

Entry informationi

Entry nameiA0A2I0LZE8_COLLI
AccessioniPrimary (citable) accession number: A0A2I0LZE8
Entry historyiIntegrated into UniProtKB/TrEMBL: February 28, 2018
Last sequence update: February 28, 2018
Last modified: June 20, 2018
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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