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Protein

30S ribosomal protein S12

Gene

rpsL

Organism
Flavobacterium sp. 2
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.UniRule annotation
With S4 and S5 plays an important role in translational accuracy.UniRule annotation

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported, RNA-binding, rRNA-bindingUniRule annotation, tRNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S12UniRule annotation
Gene namesi
Name:rpsLUniRule annotation
ORF Names:CLU99_3838Imported
OrganismiFlavobacterium sp. 2Imported
Taxonomic identifieri308053 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeFlavobacterium
Proteomesi
  • UP000230715 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS12 family.UniRule annotation

Family and domain databases

CDDicd03368 Ribosomal_S12, 1 hit
HAMAPiMF_00403_B Ribosomal_S12_B, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR006032 Ribosomal_S12/S23
IPR005679 Ribosomal_S12_bac
PANTHERiPTHR11652 PTHR11652, 1 hit
PfamiView protein in Pfam
PF00164 Ribosom_S12_S23, 1 hit
PIRSFiPIRSF002133 Ribosomal_S12/S23, 1 hit
PRINTSiPR01034 RIBOSOMALS12
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00981 rpsL_bact, 1 hit
PROSITEiView protein in PROSITE
PS00055 RIBOSOMAL_S12, 1 hit

Sequencei

Sequence statusi: Complete.

A0A2G6VMD3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPTIQQLVRT GRTQITKKSK SVALDSCPQR RGVCTRVYTT TPKKPNSAMR
60 70 80 90 100
KVARVRLTNG NEVNAYIPGE GHNLQEHSIV LVRGGRVKDL PGVRYHIVRG
110 120
ALDTSGVAGR TQRRSKYGAK RPKEAKK
Length:127
Mass (Da):14,090
Last modified:January 31, 2018 - v1
Checksum:i9ABE1608FE9524B9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
PEFC01000003 Genomic DNA Translation: PIF59266.1
RefSeqiWP_007136570.1, NZ_PEFC01000003.1

Genome annotation databases

GeneIDi35857258

Similar proteinsi

Entry informationi

Entry nameiA0A2G6VMD3_9FLAO
AccessioniPrimary (citable) accession number: A0A2G6VMD3
Entry historyiIntegrated into UniProtKB/TrEMBL: January 31, 2018
Last sequence update: January 31, 2018
Last modified: April 25, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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