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Protein
Submitted name:

protein VPRBP isoform X4

Gene

dcaf1

Organism
Ictalurus punctatus (Channel catfish) (Silurus punctatus)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
protein VPRBP isoform X4Imported
Gene namesi
Name:dcaf1Imported
OrganismiIctalurus punctatus (Channel catfish) (Silurus punctatus)Imported
Taxonomic identifieri7998 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiSiluriformesIctaluridaeIctalurus
Proteomesi
  • UP000221080 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini705 – 737LisHInterPro annotationAdd BLAST33

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1253 – 1276Sequence analysisAdd BLAST24

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR016024 ARM-type_fold
IPR006594 LisH
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR036322 WD40_repeat_dom_sf
SMARTiView protein in SMART
SM00667 LisH, 1 hit
SUPFAMiSSF48371 SSF48371, 2 hits
SSF50978 SSF50978, 2 hits
PROSITEiView protein in PROSITE
PS50896 LISH, 1 hit

Sequencei

Sequence statusi: Complete.

A0A2D0R2A3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLQVCLEEPW RTRILLPTTV PLMLQRLREI QEKDAESRKD FKRPSLRKSM
60 70 80 90 100
EPLLPLDEEA VDGKFSPSPS RIHSENNTFG HESDGAVSPE HSLTKSSSRV
110 120 130 140 150
HSGVKGVMKL AVPHQSELEN PGEGARDFRK RMEQENGRKA KQKLNFSLPE
160 170 180 190 200
PERNFSELSN SSWSEMSPWV IGNSYHLYPL TAGIEQRLIL QYLTPLGEYQ
210 220 230 240 250
ELLAVFMQLR ARELLMHYMD LKQTNDVQLT FEALKYLASL LLHKKFAAEF
260 270 280 290 300
VAHGGVQKLL EIPRPSMAAT GVSLCLYYLA YNQDAMERVC MLPHSLLAEV
310 320 330 340 350
VSYTLWLLEC SHASGCCHAT MFFSICFTFR AVLELFDNQD GLRRLVNLIS
360 370 380 390 400
TLEILNPEDQ GALLSDDEIF SSRQTAKHTC MALRRYFEAH LAIKVEQVKQ
410 420 430 440 450
SLQRTEGGAL IHPQPYYKPC SYTRDQVVEM VEFLIEHGPV RLYWEPAEVF
460 470 480 490 500
HKLSCVQLLL QLISIACDWR TYYGRSDTVR YALDILSILT VIPKTQLLLA
510 520 530 540 550
ENVSVLDEGG STISTVGMSI VLVVAEGEVF VNDAEIQKSA LQVVINCVCA
560 570 580 590 600
PDKRISSIGK FISGAPRRRL PQSHRTSESV LAKMWNVVQS NNGIKVLLSL
610 620 630 640 650
LTIKMPITDA DQIRALACKA LVGLARSTTV RQIISKLPLF SSGQIQQLMK
660 670 680 690 700
EPVLQDKRND HVRFCKYAAE LIEQVSGKPL LIGTDVSLAR LQRANVVAQT
710 720 730 740 750
RIAFPEKELL LLIRNHLLSK GLTDTASALT KEADLPMGIH SHAHASVAPF
760 770 780 790 800
SQSVSTPPTP TAIPRSPRLA NGVAARLGGH ASHVTTSSHH LQPRPSTSQL
810 820 830 840 850
PPPAPPTSSH HSTVSLVGRI VFSRERPTTY AAGLKKPRVL RQKSDHGAFS
860 870 880 890 900
QSPAMKKQLD RHLPSPPALD SIITEYLREQ HARCKNPVTT CPPFSLFMPH
910 920 930 940 950
QCPEPKQRCQ APTNFTARHT RRVAYPKYGG VDGGCFDRQL IFSRFRPISV
960 970 980 990 1000
FREAEEDESG FMCCAFSARE RFLMLGTCTG QLKLYNVFGG QEEASYSCHS
1010 1020 1030 1040 1050
SAITHLEPSR DGSLLLTSAS WSYPLSALWG MKSVFIMKHS FLDDHYVEFS
1060 1070 1080 1090 1100
KLSQDRVIGT KEHIAHIYDI QTGQKTLTLN NPDLANNYKR NCATFNPTDD
1110 1120 1130 1140 1150
LVLNDGVMWD VRSAQAIHKF DKFNMNISGV FHPNGLEVII NTEIWDLRTF
1160 1170 1180 1190 1200
HLLHTVPALD QCRIVFNNNG TVIYGAMLQA DDEDEMMEQQ MKSPFGSSFR
1210 1220 1230 1240 1250
TFDATDYKPI ATIDVKRNIF DLCTDTKDCY LAVIENQDSI NMDTVCRLYG
1260 1270 1280 1290 1300
VGRQRLAEEE EDEEDQEDED QEDEDDDDDS DDDMDDIDTD PLMAELENEN
1310 1320 1330 1340 1350
NGEEEEDGEQ DFSPSDDEEV ARLLEEDGED DDDDDDDDDD DDDDEEDDSE
1360 1370 1380
DNEGDVELVM DNTDSSDNSD LEDDIILSLN E
Length:1,381
Mass (Da):155,375
Last modified:December 20, 2017 - v1
Checksum:i58B349D09A50728B
GO

Sequence databases

RefSeqiXP_017323920.1, XM_017468431.1
UniGeneiIpu.10249

Genome annotation databases

GeneIDi108265762

Similar proteinsi

Entry informationi

Entry nameiA0A2D0R2A3_ICTPU
AccessioniPrimary (citable) accession number: A0A2D0R2A3
Entry historyiIntegrated into UniProtKB/TrEMBL: December 20, 2017
Last sequence update: December 20, 2017
Last modified: June 20, 2018
This is version 6 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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