Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

DNA polymerase alpha subunit B

Gene

pola2

Organism
Ictalurus punctatus (Channel catfish) (Silurus punctatus)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

May play an essential role at the early stage of chromosomal DNA replication by coupling the polymerase alpha/primase complex to the cellular replication machinery.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processDNA replicationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
DNA polymerase alpha subunit BUniRule annotation
Gene namesi
Name:pola2Imported
OrganismiIctalurus punctatus (Channel catfish) (Silurus punctatus)Imported
Taxonomic identifieri7998 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiSiluriformesIctaluridaeIctalurus
Proteomesi
  • UP000221080 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusUniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini24 – 243Pol_alpha_B_NInterPro annotationAdd BLAST220
Domaini346 – 552DNA_pol_E_BInterPro annotationAdd BLAST207

Sequence similaritiesi

Belongs to the DNA polymerase alpha subunit B family.UniRule annotation

Phylogenomic databases

KOiK02321

Family and domain databases

InterProiView protein in InterPro
IPR007185 DNA_pol_alpha/epsilon_bsu
IPR016722 DNA_pol_alpha_bsu
IPR013627 Pol_alpha_B_N
PANTHERiPTHR23061 PTHR23061, 1 hit
PfamiView protein in Pfam
PF04042 DNA_pol_E_B, 1 hit
PF08418 Pol_alpha_B_N, 1 hit
PIRSFiPIRSF018300 DNA_pol_alph_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A2D0QXG3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAAVTAEELK LELETFDIAC EEESVLDRML EQCMCHRMKG QDIVFEWVAF
60 70 80 90 100
STTKGQLKLS LNTLESFEHE VLNKRQKTKG SSKNKFSNTT RDVHSIQDLI
110 120 130 140 150
KAEEEEESLL DSYSTPGKGS QKRVLTTPEH PKSKRCAARL SSPSLLFSPA
160 170 180 190 200
SFSPGATPSQ KYSTRSARGE VVAMFGAVQG PRWTGKGQTA VQVELLESRE
210 220 230 240 250
NSLTNSYKFM FQRLRDVRDV LTEKIDLLGE EIRSHFNIEE FSPVSLPAQD
260 270 280 290 300
TVSVLGQVCC DSNGKLNAQS VLLEASQEHG ARQVPVDVSE LKDYSLFPGQ
310 320 330 340 350
VVVMEGMNTS GSRFVASKIY EGIPLPFYSN PELKQEMNEV SESVMVLVAC
360 370 380 390 400
GPYTPSDSLA YDPLIDLINV INKDSPDVCI LLGPFVDSKH EQIEKAQVTE
410 420 430 440 450
TFEAIFSKCI ESIVDGTRGT GCKLVFVPSQ RDVHHHYVYP QPPFTLPDLK
460 470 480 490 500
KDDVQRVTLA PDPCTLLIGG VTFGMTSTDI LFYMGAEEIS CAAGSDRFSR
510 520 530 540 550
IMKHMLTQRS YYPLYPPAEE VNMDYERFQQ YGQLPLTPDI LLVPSELRYF
560 570 580 590 600
IKDVIGCVCI NPARLTKGQV GGTYGRLLIQ QNPVQEEGKR VSPCIAAQVV

KI
Length:602
Mass (Da):67,035
Last modified:December 20, 2017 - v1
Checksum:i72DC68B9A2115739
GO

Sequence databases

RefSeqiXP_017323097.1, XM_017467608.1

Genome annotation databases

GeneIDi108265364
KEGGiipu:108265364

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_017323097.1, XM_017467608.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi108265364
KEGGiipu:108265364

Organism-specific databases

CTDi23649

Phylogenomic databases

KOiK02321

Family and domain databases

InterProiView protein in InterPro
IPR007185 DNA_pol_alpha/epsilon_bsu
IPR016722 DNA_pol_alpha_bsu
IPR013627 Pol_alpha_B_N
PANTHERiPTHR23061 PTHR23061, 1 hit
PfamiView protein in Pfam
PF04042 DNA_pol_E_B, 1 hit
PF08418 Pol_alpha_B_N, 1 hit
PIRSFiPIRSF018300 DNA_pol_alph_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2D0QXG3_ICTPU
AccessioniPrimary (citable) accession number: A0A2D0QXG3
Entry historyiIntegrated into UniProtKB/TrEMBL: December 20, 2017
Last sequence update: December 20, 2017
Last modified: April 25, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again