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Protein
Submitted name:

voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X5

Gene

cacna2d1

Organism
Ictalurus punctatus (Channel catfish) (Silurus punctatus)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X5Imported
Gene namesi
Name:cacna2d1Imported
OrganismiIctalurus punctatus (Channel catfish) (Silurus punctatus)Imported
Taxonomic identifieri7998 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiSiluriformesIctaluridaeIctalurus
Proteomesi
  • UP000221080 Componenti: Genome assembly

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 28Sequence analysisAdd BLAST28
ChainiPRO_501303947529 – 867Sequence analysisAdd BLAST839

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini256 – 418VWFAInterPro annotationAdd BLAST163

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di3.40.50.410, 1 hit
InterProiView protein in InterPro
IPR013680 VDCC_a2/dsu
IPR013608 VWA_N
IPR002035 VWF_A
IPR036465 vWFA_dom_sf
PfamiView protein in Pfam
PF08473 VGCC_alpha2, 1 hit
PF00092 VWA, 1 hit
PF08399 VWA_N, 1 hit
SMARTiView protein in SMART
SM00327 VWA, 1 hit
SUPFAMiSSF53300 SSF53300, 1 hit
PROSITEiView protein in PROSITE
PS50234 VWFA, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All

A0A2D0QUA1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MARGMSLGSP LTPLLIVLAC SALHGSRASQ FPTSLIIKEW VDQMQQELVT
60 70 80 90 100
VADTASAGKS LVEIFMNNQK YYTVETNYAG RLVDNAARNI ENFLKKRAKA
110 120 130 140 150
LESLATAAEN FQMEHQWKDE FADSDIVYYN AKDNLDVNET EGKKNRIRPE
160 170 180 190 200
FKEDPSFKNR LISYNHTAVH IPTDIYDGST IVLNELNWTE ALEDVFKKNK
210 220 230 240 250
EEDPTLLWQV FGSATGLARY YPASPWKDAR KTPSKIDLYD VRRRPWYVQG
260 270 280 290 300
AASPKDMLIL VDASGSVSGL TLKLIRTSVS EMLETLSDDD YVNVVNANVR
310 320 330 340 350
NKKILKDAVQ NITAKGITNY TKGFEFAFKQ LSDQNVSRRA NCNKIIMLFT
360 370 380 390 400
DGGEERAQEI FERYNRDKEV RVFTFSVGQH NYDTGPIQWM ACANKGYFYE
410 420 430 440 450
IPSIGAIRIN TQEYLDVLGR PMVLADAKQV QWTNVYLDAL ELGLVITGTL
460 470 480 490 500
PVFNKTKSRE NSSRIQHENQ LILGVMGVDV SLDDIKRLTP RFTIGPNGYY
510 520 530 540 550
FAIDPNGYVL LHPNLQPKNP KFQEPVTLDF LDAELENDIK VEIRTMMIDR
560 570 580 590 600
DPGERKIETL VKSLDERYID RGVRTYTWVP VNGTDYSLAL VLPEYNMHYI
610 620 630 640 650
QANLGDVKQA MWQKVSDTMQ VEKFEDYGYT FIAPREYCQD LKPSTNNTQF
660 670 680 690 700
LMDVIQYIDK RMPSDPMCNV TLLNRMLLDA GLTAELVNLW KKQSVEGVLA
710 720 730 740 750
RFVATDGGIT RVYPKSAGEE WTENAETFDS SFYKRSLDND IYIFTAPYVN
760 770 780 790 800
KSRESSYEYG ILVSKAVELD FNGVKLKPAV VGVKLNVSAW MNSFMNATMK
810 820 830 840 850
INCKDEICGC LRNDKHVDCV ILDDGGFLLM SNQDEYITQV RVPVLTSVSQ
860
ENAGAYYCLS IQYSSSP
Length:867
Mass (Da):98,476
Last modified:December 20, 2017 - v1
Checksum:iA2F72DDDE9214F1C
GO

Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2D0QU96A0A2D0QU96_ICTPU
voltage-dependent calcium channel s...
cacna2d1
883Annotation score:
A0A2D0QWL4A0A2D0QWL4_ICTPU
voltage-dependent calcium channel s...
cacna2d1
856Annotation score:
A0A2D0QTY6A0A2D0QTY6_ICTPU
voltage-dependent calcium channel s...
cacna2d1
868Annotation score:
A0A2D0QWL0A0A2D0QWL0_ICTPU
voltage-dependent calcium channel s...
cacna2d1
882Annotation score:
A0A2D0QTZ3A0A2D0QTZ3_ICTPU
voltage-dependent calcium channel s...
cacna2d1
880Annotation score:

Sequence databases

RefSeqiXP_017321889.1, XM_017466400.1
UniGeneiIpu.70204

Genome annotation databases

GeneIDi108264659

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_017321889.1, XM_017466400.1
UniGeneiIpu.70204

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi108264659

Organism-specific databases

CTDi781

Family and domain databases

Gene3Di3.40.50.410, 1 hit
InterProiView protein in InterPro
IPR013680 VDCC_a2/dsu
IPR013608 VWA_N
IPR002035 VWF_A
IPR036465 vWFA_dom_sf
PfamiView protein in Pfam
PF08473 VGCC_alpha2, 1 hit
PF00092 VWA, 1 hit
PF08399 VWA_N, 1 hit
SMARTiView protein in SMART
SM00327 VWA, 1 hit
SUPFAMiSSF53300 SSF53300, 1 hit
PROSITEiView protein in PROSITE
PS50234 VWFA, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2D0QUA1_ICTPU
AccessioniPrimary (citable) accession number: A0A2D0QUA1
Entry historyiIntegrated into UniProtKB/TrEMBL: December 20, 2017
Last sequence update: December 20, 2017
Last modified: April 25, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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