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Protein
Submitted name:

integrin alpha-9

Gene

itga9

Organism
Ictalurus punctatus (Channel catfish) (Silurus punctatus)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Biological processi

Keywordsi

Molecular functionIntegrinUniRule annotationSAAS annotationImported, ReceptorUniRule annotationSAAS annotation
Biological processCell adhesionUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
integrin alpha-9Imported
Gene namesi
Name:itga9Imported
OrganismiIctalurus punctatus (Channel catfish) (Silurus punctatus)Imported
Taxonomic identifieri7998 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiSiluriformesIctaluridaeIctalurus
Proteomesi
  • UP000221080 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei975 – 999HelicalUniRule annotationAdd BLAST25

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati32 – 97FG-GAPPROSITE-ProRule annotationAdd BLAST66
Repeati112 – 175FG-GAPPROSITE-ProRule annotationAdd BLAST64
Repeati183 – 232FG-GAPPROSITE-ProRule annotationAdd BLAST50
Repeati234 – 288FG-GAPPROSITE-ProRule annotationAdd BLAST55
Repeati289 – 348FG-GAPPROSITE-ProRule annotationAdd BLAST60
Repeati349 – 407FG-GAPPROSITE-ProRule annotationAdd BLAST59
Repeati412 – 473FG-GAPPROSITE-ProRule annotationAdd BLAST62
Domaini458 – 895Integrin_alpha2InterPro annotationAdd BLAST438

Sequence similaritiesi

Belongs to the integrin alpha chain family.UniRule annotationSAAS annotation

Keywords - Domaini

RepeatSAAS annotation, Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

KOiK06585

Family and domain databases

Gene3Di2.130.10.130, 1 hit
InterProiView protein in InterPro
IPR013517 FG-GAP
IPR013519 Int_alpha_beta-p
IPR000413 Integrin_alpha
IPR013649 Integrin_alpha-2
IPR018184 Integrin_alpha_C_CS
IPR028994 Integrin_alpha_N
IPR032695 Integrin_dom_sf
PfamiView protein in Pfam
PF01839 FG-GAP, 2 hits
PF08441 Integrin_alpha2, 1 hit
PRINTSiPR01185 INTEGRINA
SMARTiView protein in SMART
SM00191 Int_alpha, 5 hits
SUPFAMiSSF69179 SSF69179, 3 hits
PROSITEiView protein in PROSITE
PS51470 FG_GAP, 7 hits
PS00242 INTEGRIN_ALPHA, 1 hit

Sequencei

Sequence statusi: Complete.

A0A2D0QLA1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MYCTRTGLLT WKSRMLDVLC VCLSLSLVCA YNIDLDHPLV FRGQNATFFG
60 70 80 90 100
YSVLEHFHNN TRWILVGAPR ANSSFSNSVS SPGAVFKCRI HSNPEHRCTE
110 120 130 140 150
IDLGRGNKKR ESCGKTCQGD RDDEWMGVSL ARQDKPNGRV LACAHRWKNV
160 170 180 190 200
YYESEHILPH GYCSLIQPTL QGRAQALIPC YEDHKKMYGE EHGSCQAGIA
210 220 230 240 250
GAFTEELVVM GAPGSYYWTG TVKVFNITSS TQYSLNKNQL NSQRYSYLGY
260 270 280 290 300
AVTAGHFSSP TAIDIAAGAP QDGGGGKVYV FRIDGVSLVK VFQESGKLMG
310 320 330 340 350
SYFGSSLCAV DLNADGLSDL LVGAPMFSEV RDEGQVSVFI SRGNGVMEEA
360 370 380 390 400
MVLNGDNAYN AHFGECISAI GDIDDDGYQD VAIGAPKEDD FGGAVYIYHG
410 420 430 440 450
DAKGIVNKYS MRLSGRSFNP AIQMFGQSIS GNVDMDGNGY PDVTIGAFMA
460 470 480 490 500
DSVVLLRSKS VITVDVSIYL PASINITVPQ CHEGPQHLNC FNVSVCMRFR
510 520 530 540 550
GKHVPGRIEL LYNLTADADK RYKGLSSRVY FTHGGEQSGT VSQNFSLSIN
560 570 580 590 600
QQECHHYTAY VRKEVKDVFA AITFEASYSL GKHVLDVDRG RELASLSPVL
610 620 630 640 650
RWRKGDKIAQ RNETWFEKNC LSDDCAADLK LHGKLLLSGH HIRPHLALGG
660 670 680 690 700
VKNVSLNITI VNAGDDAYDT NIYLNFSREV HYINFLQREE KGISCELIQL
710 720 730 740 750
DFLKCSVGFP FMRAQTKYHL SVLFDTSHLS GENETLLFLV HAKSANPEHE
760 770 780 790 800
NKLHDNTLEL SILLMHEVDT AVTGVVTPSS FVYGNSVDSS HFVKLEDLEC
810 820 830 840 850
NFQPLNFTFQ VINNGPSRLP GSTVDIRIPN TLVANGADMF HIIDTHVGEG
860 870 880 890 900
RGNCTWHRNP TPCIIIQERE NIFHTIFAFF TKSGRKVLDC DRPGRACLTI
910 920 930 940 950
SCSLGSQAKD EAALIDVQML LNTETLKKDS SSVIQFVTRS HVQVDSRAME
960 970 980 990 1000
VSSGLPEDIS LVFEALHSQE PRGYVVGWII AISLLVGILI FLLLAVLLWK
1010 1020 1030
MGFFRRHYRE IIEAEKNRKD SDESWDWVQK SE
Length:1,032
Mass (Da):114,530
Last modified:December 20, 2017 - v1
Checksum:i00583BAD2F5430DE
GO

Sequence databases

RefSeqiXP_017319172.1, XM_017463683.1

Genome annotation databases

GeneIDi108263163
KEGGiipu:108263163

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_017319172.1, XM_017463683.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi108263163
KEGGiipu:108263163

Organism-specific databases

CTDi3680

Phylogenomic databases

KOiK06585

Family and domain databases

Gene3Di2.130.10.130, 1 hit
InterProiView protein in InterPro
IPR013517 FG-GAP
IPR013519 Int_alpha_beta-p
IPR000413 Integrin_alpha
IPR013649 Integrin_alpha-2
IPR018184 Integrin_alpha_C_CS
IPR028994 Integrin_alpha_N
IPR032695 Integrin_dom_sf
PfamiView protein in Pfam
PF01839 FG-GAP, 2 hits
PF08441 Integrin_alpha2, 1 hit
PRINTSiPR01185 INTEGRINA
SMARTiView protein in SMART
SM00191 Int_alpha, 5 hits
SUPFAMiSSF69179 SSF69179, 3 hits
PROSITEiView protein in PROSITE
PS51470 FG_GAP, 7 hits
PS00242 INTEGRIN_ALPHA, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2D0QLA1_ICTPU
AccessioniPrimary (citable) accession number: A0A2D0QLA1
Entry historyiIntegrated into UniProtKB/TrEMBL: December 20, 2017
Last sequence update: December 20, 2017
Last modified: November 7, 2018
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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