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Protein
Submitted name:

CLIP-associating protein 2 isoform X8

Gene

clasp2

Organism
Ictalurus punctatus (Channel catfish) (Silurus punctatus)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
CLIP-associating protein 2 isoform X8Imported
Gene namesi
Name:clasp2Imported
OrganismiIctalurus punctatus (Channel catfish) (Silurus punctatus)Imported
Taxonomic identifieri7998 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiSiluriformesIctaluridaeIctalurus
Proteomesi
  • UP000221080 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 233TOGInterPro annotationAdd BLAST226
Repeati169 – 207HEATPROSITE-ProRule annotationAdd BLAST39
Domaini320 – 550TOGInterPro annotationAdd BLAST231
Domaini889 – 1130TOGInterPro annotationAdd BLAST242
Domaini1283 – 1514TOGInterPro annotationAdd BLAST232

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1291 – 1315Sequence analysisAdd BLAST25

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Gene3Di1.25.10.10, 4 hits
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR024395 CLASP_N_dom
IPR021133 HEAT_type_2
IPR034085 TOG
PfamiView protein in Pfam
PF12348 CLASP_N, 2 hits
SMARTiView protein in SMART
SM01349 TOG, 4 hits
SUPFAMiSSF48371 SSF48371, 2 hits
PROSITEiView protein in PROSITE
PS50077 HEAT_REPEAT, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 18 potential isoforms that are computationally mapped.Show allAlign All

A0A2D0PVI7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEENDNMDYF YQQVLQKDVS RRLQVGPDLI DYLSDPQRSW DVEQDKPRLD
60 70 80 90 100
KTIDELTGWV NSSNYKVALL GIDIVGAFVD RMSDHFRGYV GTVVPALVDR
110 120 130 140 150
LGDGKDQVRD QAQTIILKMM EEAATPMYVW ERMFTGFKHK NFRSREGLCL
160 170 180 190 200
CLVATLNAHG AQPLSLSKFV PHLCALTGDQ NPQVRETAVT ALVEVYRHVG
210 220 230 240 250
ERVRADLGKR GLPAARLQTI LGRFDEVLNS GNMALSLSQD HSFDDDDSVD
260 270 280 290 300
GSQPSSAQAA FKVPKVPKKP ADSASSSRRP SATGATKMSV SKEGAGAVDE
310 320 330 340 350
EDFIKAFTDV PTVQIYSTRD LEDNLNKIRE ILSDDKHDWD QRTNALKKVR
360 370 380 390 400
SLLVAGAKNY DCFYQHLRLL DGAFKISAKD LRSQVVREAC ITVAHLSTVL
410 420 430 440 450
GNRFDHGAEA IVPVLFNLIP NCAKVMATSG TAAIRIIIRH THVPRLIPLI
460 470 480 490 500
TGNCTSKAVA VRRRCYVFLD LLLQEWQTHS LEKHTAVLVD SIKKGIRDAD
510 520 530 540 550
SEARVEARKA YWGLRSHFPV EAESLYNSLE SSYQKTLQSC LKSSGSVASL
560 570 580 590 600
PQSDRSSSSS QESLNRPLTS KWSAAPGRVP ASSKSSGSPG SLQRSRSDVD
610 620 630 640 650
VNAAASAKAR HSGQAGGAGR LTTALPPGTY ASLGRLRTKQ PLSTPSGISS
660 670 680 690 700
SQVDSRARSR TKMVSQSQRS DDSDCTPAGS RSGSPGRVLA STALSTLSTG
710 720 730 740 750
AQRVSAAPGS QRRSRIPRSQ GCSRDSSPTR LSVAPSNVSH IYNGAKGARG
760 770 780 790 800
SRIPRPSVSQ GCSREASRES SRDTSPVRSF TPLASRHYSR STGTLHASDA
810 820 830 840 850
FGAAGSGLGI SQSSRLSSSV SAMRVLNTGS DVEEALADAL LLGDTRSKKK
860 870 880 890 900
PARRRYETYG MYSDDDANSD ASSACSERSY SSRNGSIPTY MRQAEDVAEV
910 920 930 940 950
LNRCASANWS ERKEGLMGLQ ALLKNQRALS RVELKRLCEI FTRMFADPHS
960 970 980 990 1000
KVFSMFLETL VDFIIVHKAD LQDWLFVLLT QLLKKMGADL LGSVQAKVQK
1010 1020 1030 1040 1050
ALDVTRESFP NDLQFTILMR FTVDQTQTPN LKVKVAILKY IETLTLQMEP
1060 1070 1080 1090 1100
QDFVNSSETR LAVSRIITWT TEPKSSDVRK AAQSVLIALF QLNTPEFTML
1110 1120 1130 1140 1150
LGALPKTFQD GATKLLQNHL RNTGGVAPAP VGSPLTRHTP RSPANWSSPL
1160 1170 1180 1190 1200
TSPTNTSQNT PSPSAFDYDT ENMNSEEIYS SLRGVTQAIQ NFSVRSQEDM
1210 1220 1230 1240 1250
SEPPRKREGD GEEGGADTTD TGRTALDNKT SLLNTMPLLS SSARPSKEYQ
1260 1270 1280 1290 1300
PGSYSDSSFG SSPFSKSLKD ALDQDGESLT DDSSVDQSEV VAELLKELSN
1310 1320 1330 1340 1350
HSERVEERKA ALCELMRLIR ETQLHVWDEH FKTILLLLLE TLGDGEHVIR
1360 1370 1380 1390 1400
ALALRVLKEI LNRQPWRFKN YAELTIMKTL EAHKDPHKEV VRAAEEAAAM
1410 1420 1430 1440 1450
LASSISPEQC IKVLCPIIQS ADYPINLAAI KMLTKVIERL PKEGLLQMLP
1460 1470 1480 1490 1500
EIVPGLIQGY DNSESSVRKA CVFCLVAIYA IIGEDLKPYL SQLSGSKLKL
1510 1520
LNLYIKRAQS GSSGSDQSSD VGGQGL
Length:1,526
Mass (Da):167,185
Last modified:December 20, 2017 - v1
Checksum:i5BCF7E4C47F54684
GO

Computationally mapped potential isoform sequencesi

There are 18 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2D0PVG6A0A2D0PVG6_ICTPU
CLIP-associating protein 2 isoform ...
clasp2
1,546Annotation score:
A0A2D0PY41A0A2D0PY41_ICTPU
CLIP-associating protein 2 isoform ...
clasp2
1,532Annotation score:
A0A2D0PU28A0A2D0PU28_ICTPU
CLIP-associating protein 2 isoform ...
clasp2
1,483Annotation score:
A0A2D0PY52A0A2D0PY52_ICTPU
CLIP-associating protein 2 isoform ...
clasp2
1,475Annotation score:
A0A2D0PVH3A0A2D0PVH3_ICTPU
CLIP-associating protein 2 isoform ...
clasp2
1,537Annotation score:
A0A2D0PVJ2A0A2D0PVJ2_ICTPU
CLIP-associating protein 2 isoform ...
clasp2
1,489Annotation score:
A0A2D0PX83A0A2D0PX83_ICTPU
CLIP-associating protein 2 isoform ...
clasp2
1,516Annotation score:
A0A2D0PU23A0A2D0PU23_ICTPU
CLIP-associating protein 2 isoform ...
clasp2
1,525Annotation score:
A0A2D0PX88A0A2D0PX88_ICTPU
CLIP-associating protein 2 isoform ...
clasp2
1,475Annotation score:
A0A2D0PY36A0A2D0PY36_ICTPU
CLIP-associating protein 2 isoform ...
clasp2
1,545Annotation score:
There are more potential isoformsShow all

Sequence databases

RefSeqiXP_017310037.1, XM_017454548.1

Genome annotation databases

GeneIDi108257113

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_017310037.1, XM_017454548.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi108257113

Organism-specific databases

CTDi23122

Family and domain databases

Gene3Di1.25.10.10, 4 hits
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR024395 CLASP_N_dom
IPR021133 HEAT_type_2
IPR034085 TOG
PfamiView protein in Pfam
PF12348 CLASP_N, 2 hits
SMARTiView protein in SMART
SM01349 TOG, 4 hits
SUPFAMiSSF48371 SSF48371, 2 hits
PROSITEiView protein in PROSITE
PS50077 HEAT_REPEAT, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2D0PVI7_ICTPU
AccessioniPrimary (citable) accession number: A0A2D0PVI7
Entry historyiIntegrated into UniProtKB/TrEMBL: December 20, 2017
Last sequence update: December 20, 2017
Last modified: November 7, 2018
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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