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Protein
Submitted name:

probable E3 ubiquitin-protein ligase makorin-2 isoform X3

Gene

mkrn2

Organism
Ictalurus punctatus (Channel catfish) (Silurus punctatus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri9 – 36C3H1-typePROSITE-ProRule annotationAdd BLAST28
Zinc fingeri144 – 166C3H1-typePROSITE-ProRule annotationAdd BLAST23
Zinc fingeri295 – 324C3H1-typePROSITE-ProRule annotationAdd BLAST30

GO - Molecular functioni

Keywordsi

Molecular functionLigaseImported
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
probable E3 ubiquitin-protein ligase makorin-2 isoform X3Imported
Gene namesi
Name:mkrn2Imported
OrganismiIctalurus punctatus (Channel catfish) (Silurus punctatus)Imported
Taxonomic identifieri7998 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiSiluriformesIctaluridaeIctalurus
Proteomesi
  • UP000221080 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 36C3H1-typeInterPro annotationAdd BLAST28
Domaini144 – 166C3H1-typeInterPro annotationAdd BLAST23
Domaini212 – 266RING-typeInterPro annotationAdd BLAST55
Domaini295 – 324C3H1-typeInterPro annotationAdd BLAST30

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri9 – 36C3H1-typePROSITE-ProRule annotationAdd BLAST28
Zinc fingeri144 – 166C3H1-typePROSITE-ProRule annotationAdd BLAST23
Zinc fingeri295 – 324C3H1-typePROSITE-ProRule annotationAdd BLAST30

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR026293 Makorin_2
IPR000571 Znf_CCCH
IPR036855 Znf_CCCH_sf
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PANTHERiPTHR11224:SF17 PTHR11224:SF17, 1 hit
PfamiView protein in Pfam
PF00642 zf-CCCH, 2 hits
SMARTiView protein in SMART
SM00184 RING, 1 hit
SM00356 ZnF_C3H1, 3 hits
SUPFAMiSSF90229 SSF90229, 1 hit
PROSITEiView protein in PROSITE
PS50103 ZF_C3H1, 3 hits
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

A0A2D0PLZ1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MFSHDLATSK PSTICKFYQK GVCAYGDRCR YDHIKPGGRG GGPPMDHSNR
60 70 80 90 100
TGSAGASVLP STGPGPPPSA TRITKKPIVL RDRALGSDSR GQPYSGESAE
110 120 130 140 150
LLDCLDYRDI SQVKPHSYLD AIRSGLESSA TASPYPDLSH QALLCPYAAA
160 170 180 190 200
GQCHYGDTCP YLHGDMCEIC RLQVLHPHDP VQRAAHEKVC MTAFEKDMEQ
210 220 230 240 250
AFAVQQSQEK VCSICMEVVY EKASPSERRF GILSSCCHTY CLSCIRQWRC
260 270 280 290 300
AKQFDNKIIK SCPECRVVSE FVIPSMYWVE DQEEKNRLIE EFKSGVSKKP
310 320 330 340 350
CKYFDQGRGT CPFGGKCFYM HAYPDGTRAE PDKPRKQLSS EGNVRFLNSV
360 370 380 390
RLWDFIEERE HRAVPQYEDE VNDLGELFMQ LSGAGEESGT SASP
Length:394
Mass (Da):43,920
Last modified:December 20, 2017 - v1
Checksum:i4A59217F68F02933
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2D0PHX3A0A2D0PHX3_ICTPU
probable E3 ubiquitin-protein ligas...
mkrn2
419Annotation score:
W5ULW4W5ULW4_ICTPU
Putative E3 ubiquitin-protein ligas...
mkrn2
416Annotation score:

Sequence databases

RefSeqiXP_017306075.1, XM_017450586.1
XP_017306077.1, XM_017450588.1
UniGeneiIpu.19325

Genome annotation databases

GeneIDi108255013

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_017306075.1, XM_017450586.1
XP_017306077.1, XM_017450588.1
UniGeneiIpu.19325

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi108255013

Organism-specific databases

CTDi23609

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR026293 Makorin_2
IPR000571 Znf_CCCH
IPR036855 Znf_CCCH_sf
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PANTHERiPTHR11224:SF17 PTHR11224:SF17, 1 hit
PfamiView protein in Pfam
PF00642 zf-CCCH, 2 hits
SMARTiView protein in SMART
SM00184 RING, 1 hit
SM00356 ZnF_C3H1, 3 hits
SUPFAMiSSF90229 SSF90229, 1 hit
PROSITEiView protein in PROSITE
PS50103 ZF_C3H1, 3 hits
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A2D0PLZ1_ICTPU
AccessioniPrimary (citable) accession number: A0A2D0PLZ1
Entry historyiIntegrated into UniProtKB/TrEMBL: December 20, 2017
Last sequence update: December 20, 2017
Last modified: May 23, 2018
This is version 6 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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