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UniProtKB - A0A2B4SYT7 (A0A2B4SYT7_STYPI)

Entry version 7 (11 Dec 2019)
Sequence version 1 (20 Dec 2017)
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Protein
Submitted name:

Centrobin

Gene

Cntrob

Organism
Stylophora pistillata (Smooth cauliflower coral)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

Complete GO annotation on QuickGO ...

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
CentrobinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:CntrobImported
ORF Names:AWC38_SpisGene1053Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiStylophora pistillata (Smooth cauliflower coral)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri50429 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Cnidaria › Anthozoa › Hexacorallia › Scleractinia › Astrocoeniina › Pocilloporidae › Stylophora
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000225706 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni96 – 123DisorderedSequence analysisAdd BLAST28
Regioni835 – 870DisorderedSequence analysisAdd BLAST36
Regioni900 – 937DisorderedSequence analysisAdd BLAST38
Regioni970 – 1017DisorderedSequence analysisAdd BLAST48
Regioni1031 – 1120DisorderedSequence analysisAdd BLAST90

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili207 – 227Sequence analysisAdd BLAST21
Coiled coili231 – 251Sequence analysisAdd BLAST21
Coiled coili267 – 548Sequence analysisAdd BLAST282

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi96 – 111PolarSequence analysisAdd BLAST16
Compositional biasi835 – 865PolyampholyteSequence analysisAdd BLAST31
Compositional biasi970 – 990PolarSequence analysisAdd BLAST21
Compositional biasi1033 – 1069PolarSequence analysisAdd BLAST37
Compositional biasi1077 – 1094PolarSequence analysisAdd BLAST18

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR038923, Centrobin

The PANTHER Classification System

More...PANTHERi		PTHR34439, PTHR34439, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A2B4SYT7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEYSPRSTAS SIPYDSTTSH TMSMAAEVKA QHRQLFNPVT PDVSPPPQMS 
        60         70         80         90        100
NGGLRMKGKE TGSVLEVGNV TNADIQEMEQ VREHLQLMLQ NCKGYTDQSD 
       110        120        130        140        150
NEQTPRTTTD YEIQENESDK ESTISVETTS LLRRLLPNSS PLSEIQVNFQ 
       160        170        180        190        200
TPEQGVLSHD QHTRQMVSFT CDRRLNAIPT SKVTNEKTLL SENSLLRDQV 
       210        220        230        240        250
EKERFRRKHC EQQIQELHGK LLEVQQQLAF AVSAERKKDA MIEQLDKTLA 
       260        270        280        290        300
KVVDGWKKHE SEKVSIINQL KIERETAEQS QERQQEMLLQ FEKELAQAVE 
       310        320        330        340        350
ALTKEQEKAA QAESEKQLQL KQQKEERQKL LECLSNEKET VSRMEQEKIQ 
       360        370        380        390        400
LRKEKEDTEE KYVQTDEALK EHIRILEELQ SKVSSLEAEH NDSMAKEKEK 
       410        420        430        440        450
LQKEIQNTKD NQAVLSSVQI EVQRLEMELD TSKREKESLK MELRLMEAKH 
       460        470        480        490        500
EANRTKEETE RQADLEREMT QRLEEIHEQM SKTESELRES HRKQLLEMSK 
       510        520        530        540        550
KHKEELEQQL AKFHEELKKK EIKVKSTTDE YEERISAFQE KMASLSNSRL 
       560        570        580        590        600
YMEKERQMLS VRLQQMMQSH CKDAIKLLNS STVSLSPPSR TQELVHNYSS 
       610        620        630        640        650
FVKNAEEENF DWEKDPGYQP GKVPITALPF PSSQLQKHQH KIPDKISASY 
       660        670        680        690        700
TTQKPVYNGS HDSVKAESGI YSGSYLSVSG DMVRHGSLSH DQSLNPGFFP 
       710        720        730        740        750
LHTVNDDRSV IEGQSVINGD TCEGEETLLE QELETDNTLL SVFNQDHHLQ 
       760        770        780        790        800
RNISPAAVTD DTITEKLKQQ ESRQAELNHY VKMLLQRSPT DQPYEQDKHE 
       810        820        830        840        850
LPDRLMLIPS SSDLQERYSN SSSGVISPIH SDDQFEQRHG MSSHHHPFKD 
       860        870        880        890        900
SSSLSHQEFK HKAHQTQAAF TKTTVTPGVF SIPGQAREDV GFTSQVPSHV 
       910        920        930        940        950
PYTQLGQVAP HTPPRREQDS DDHPPLHPPH PGTLTPHQIT QLSRMLGLFS 
       960        970        980        990       1000
EPGQPQITAE QLFAYLRRVQ NNPPGNSHST SSTSNPVSTK AHSTHEHHVP 
      1010       1020       1030       1040       1050
GPGHSVTNSP PQAPQKQHLI TNKARRSLDS NFHKRQGSSV SGHPINPPGS 
      1060       1070       1080       1090       1100
LVTKSAEQPG QTRAHKQPVK QVSSHVGPPA RNPTGLNDGT KSAPKGGQQG 
      1110       1120
KEPKAKSAPA SKQIKINAWR
Length:1,120
Mass (Da):127,176
Last modified:December 20, 2017 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i708085C3541B291B
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
LSMT01000007 Genomic DNA Translation: PFX34040.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
LSMT01000007 Genomic DNA Translation: PFX34040.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Family and domain databases

InterProiView protein in InterPro
IPR038923, Centrobin
PANTHERiPTHR34439, PTHR34439, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A2B4SYT7_STYPI
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A2B4SYT7
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: December 20, 2017
Last sequence update: December 20, 2017
Last modified: December 11, 2019
This is version 7 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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