UniProtKB - A0A287X686 (A0A287X686_HORVV)
Protein
MADS-box domain-containing protein
Gene
N/A
Organism
Hordeum vulgare subsp. vulgare (Domesticated barley)
Status
Functioni
GO - Molecular functioni
- DNA binding Source: UniProtKB-KW
- protein dimerization activity Source: InterPro
Keywordsi
Molecular function | DNA-bindingARBA annotation |
Biological process | Transcription, Transcription regulationARBA annotation |
Names & Taxonomyi
Protein namesi | Recommended name: MADS-box domain-containing proteinInterPro annotation |
Organismi | Hordeum vulgare subsp. vulgare (Domesticated barley)Imported |
Taxonomic identifieri | 112509 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › Liliopsida › Poales › Poaceae › BOP clade › Pooideae › Triticodae › Triticeae › Hordeinae › Hordeum › |
Proteomesi |
|
Subcellular locationi
Nucleus
- nucleus Source: UniProtKB-KW
Keywords - Cellular componenti
NucleusARBA annotationFamily & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 1 – 46 | MADS-boxInterPro annotationAdd BLAST | 46 |
Phylogenomic databases
OMAi | GSANAGC |
Family and domain databases
Gene3Di | 3.40.1810.10, 1 hit |
InterProi | View protein in InterPro IPR002100, TF_MADSbox IPR036879, TF_MADSbox_sf |
Pfami | View protein in Pfam PF00319, SRF-TF, 1 hit |
PRINTSi | PR00404, MADSDOMAIN |
SMARTi | View protein in SMART SM00432, MADS, 1 hit |
SUPFAMi | SSF55455, SSF55455, 1 hit |
PROSITEi | View protein in PROSITE PS50066, MADS_BOX_2, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
A0A287X686-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MARRKVAMRL VENAPARART HAKRAKGLQK KALELATLCG VPVGFVCSGA
60 70 80 90 100
GAGAPPLEWE SEEGVLERYR RAVPPEARAG HAHRAYLETE LAKRRAKLAR
110 120 130 140 150
ARHGCPAALA DWDEALNDMT LDEARELLEA IDAALRATGD RMEALGLPAD
160 170 180 190 200
SGHGALDVQV APESSDETVI PEQLGHGGGV PWAEGYPVDM ADAAGFQQLQ
210 220 230 240 250
MVPFDGGVSD GLLERFPREH GFQMQPGGSG FQCVGGNYSG SGDGMIAPGL
260 270 280 290 300
ANADYNYSGC GDRMLAPDFA NGGYKYNYSG GGDGMLTLDS ANAVCNYTGG
310 320 330 340 350
GNGMLVPGFA NAVCNYSAGC DQMLAPGSGN AGYHWPDLTM WNTDQVWDAA
360 370 380 390 400
MPPGYYPGFA DSTLAPEHCS TEVGTGADYV NTLPSGYGYP MGMGDNFTNL
410 420 430 440
ENNYTAAHWQ AEAFQRSDAS DSTSTSTSTG ELLSAASSPH YLY
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketA0A287X646 | A0A287X646_HORVV | Uncharacterized protein | 262 | Annotation score: |
Genome annotation databases
EnsemblPlantsi | HORVU7Hr1G085730.1; HORVU7Hr1G085730.1; HORVU7Hr1G085730 |
Gramenei | HORVU7Hr1G085730.1; HORVU7Hr1G085730.1; HORVU7Hr1G085730 |
Similar proteinsi
Cross-referencesi
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Genome annotation databases
EnsemblPlantsi | HORVU7Hr1G085730.1; HORVU7Hr1G085730.1; HORVU7Hr1G085730 |
Gramenei | HORVU7Hr1G085730.1; HORVU7Hr1G085730.1; HORVU7Hr1G085730 |
Phylogenomic databases
OMAi | GSANAGC |
Gene expression databases
ExpressionAtlasi | A0A287X686, baseline |
Family and domain databases
Gene3Di | 3.40.1810.10, 1 hit |
InterProi | View protein in InterPro IPR002100, TF_MADSbox IPR036879, TF_MADSbox_sf |
Pfami | View protein in Pfam PF00319, SRF-TF, 1 hit |
PRINTSi | PR00404, MADSDOMAIN |
SMARTi | View protein in SMART SM00432, MADS, 1 hit |
SUPFAMi | SSF55455, SSF55455, 1 hit |
PROSITEi | View protein in PROSITE PS50066, MADS_BOX_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | A0A287X686_HORVV | |
Accessioni | A0A287X686Primary (citable) accession number: A0A287X686 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | November 22, 2017 |
Last sequence update: | November 22, 2017 | |
Last modified: | February 10, 2021 | |
This is version 13 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |