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Protein
Submitted name:

Predicted protein

Gene
N/A
Organism
Hordeum vulgare subsp. vulgare (Domesticated barley)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
OrganismiHordeum vulgare subsp. vulgare (Domesticated barley)Imported
Taxonomic identifieri112509 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum
Proteomesi
  • UP000011116 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei191 – 212HelicalSequence analysisAdd BLAST22
Transmembranei224 – 247HelicalSequence analysisAdd BLAST24
Transmembranei259 – 276HelicalSequence analysisAdd BLAST18
Transmembranei321 – 343HelicalSequence analysisAdd BLAST23
Transmembranei355 – 373HelicalSequence analysisAdd BLAST19

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 88SPXInterPro annotationAdd BLAST88

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

CDDicd06174 MFS, 1 hit
InterProiView protein in InterPro
IPR011701 MFS
IPR020846 MFS_dom
IPR036259 MFS_trans_sf
IPR004331 SPX_dom
PfamiView protein in Pfam
PF07690 MFS_1, 1 hit
PF03105 SPX, 1 hit
SUPFAMiSSF103473 SSF103473, 1 hit
PROSITEiView protein in PROSITE
PS51382 SPX, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 8 potential isoforms that are computationally mapped.iShow all

A0A287VIM7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
HIETIVLFLL EQQGRLASRI EKLGKQRAIL AEQPDISAIA ELREAYREVG
60 70 80 90 100
LDLIKLLKFV DLNATGIRKI LKKFDKRFSY RFTDYYVSSR SNHPYSQLQQ
110 120 130 140 150
VFKHVGVGAV VGALSRNLAD LQERQGSYLS IYDQPSSALK DPIIDMINSS
160 170 180 190 200
VDRLTRSTNF LRFLGQHALI AQEESPSTAG EEEIEDQKYH FVSLMLNLVN
210 220 230 240 250
TFLYMVNTYI IVPTADDYSV SLGAASTVCG VVIGSMAVAQ VFSSVYFSAW
260 270 280 290 300
SNKSYFKPLV FSSIVLFLGN VCYAMAYDTK SLTVLIVGRL LCGFGSARAV
310 320 330 340 350
NRRYISDCVP ARIRMQASAG FVSASALGMA CGPALAGLLQ WRFKIYMVTF
360 370 380 390 400
SQSTLPGWLM AVAWLLYLVW LCISFKEPNR STEADDTPHN RASGKSDILA

KCGYWAS
Length:407
Mass (Da):45,320
Last modified:November 22, 2017 - v1
Checksum:i08CC93190B13820C
GO

Computationally mapped potential isoform sequencesi

There are 8 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F2E110F2E110_HORVV
Predicted protein
700Annotation score:
A0A287VIM1A0A287VIM1_HORVV
Predicted protein
691Annotation score:
A0A287VIJ5A0A287VIJ5_HORVV
Predicted protein
656Annotation score:
A0A287VIK1A0A287VIK1_HORVV
Predicted protein
462Annotation score:
A0A287VIY0A0A287VIY0_HORVV
Predicted protein
646Annotation score:
A0A287VIN5A0A287VIN5_HORVV
Predicted protein
643Annotation score:
A0A287VIN7A0A287VIN7_HORVV
Predicted protein
498Annotation score:
A0A287VIN9A0A287VIN9_HORVV
Predicted protein
258Annotation score:

Genome annotation databases

EnsemblPlantsiHORVU7Hr1G011890.14; HORVU7Hr1G011890.14; HORVU7Hr1G011890
GrameneiHORVU7Hr1G011890.14; HORVU7Hr1G011890.14; HORVU7Hr1G011890

Similar proteinsi

Entry informationi

Entry nameiA0A287VIM7_HORVV
AccessioniPrimary (citable) accession number: A0A287VIM7
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2017
Last sequence update: November 22, 2017
Last modified: January 31, 2018
This is version 3 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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