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Protein
Submitted name:

Uncharacterized protein

Gene

4525082

Organism
Hordeum vulgare subsp. vulgare (Domesticated barley)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionInitiation factorPROSITE-ProRule annotation
Biological processProtein biosynthesis

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:4525082Imported
OrganismiHordeum vulgare subsp. vulgare (Domesticated barley)Imported
Taxonomic identifieri112509 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum
Proteomesi
  • UP000011116 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 83S1-likeInterPro annotationAdd BLAST76

Family and domain databases

CDDicd04451 S1_IF1, 1 hit
HAMAPiMF_00075 IF_1, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR006196 RNA-binding_domain_S1_IF1
IPR022967 S1_dom
IPR004368 TIF_IF1
PANTHERiPTHR33370 PTHR33370, 1 hit
PfamiView protein in Pfam
PF01176 eIF-1a, 1 hit
SMARTiView protein in SMART
SM00316 S1, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00008 infA, 1 hit
PROSITEiView protein in PROSITE
PS50832 S1_IF1_TYPE, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 10 potential isoforms that are computationally mapped.iShow all

A0A287TY42-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTEKKNRREK KNPREAKVTF EGLVTEALPN GMFRVRLEND TIILGYISGK
60 70 80 90 100
IRSSSIRILM GDRVKIEVSR YDSSKGRIIY RLPHKDSKRI EDSKDSEDLK

DSVDELE
Length:107
Mass (Da):12,427
Last modified:November 22, 2017 - v1
Checksum:iCFBC19823E03ABAD
GO

Computationally mapped potential isoform sequencesi

There are 10 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
S4Z1A4S4Z1A4_HORVV
DNA-directed RNA polymerase subunit...
rpoA 4525081, 4525082
339Annotation score:
S4Z0I7S4Z0I7_HORVV
30S ribosomal protein S11, chloropl...
rps11 4525082
143Annotation score:
A0A287EA09A0A287EA09_HORVV
Uncharacterized protein
4525082
448Annotation score:
A0A287E9B8A0A287E9B8_HORVV
Uncharacterized protein
4525082
261Annotation score:
A0A287U4P7A0A287U4P7_HORVV
Uncharacterized protein
4525082
257Annotation score:
A0A287RJG2A0A287RJG2_HORVV
Uncharacterized protein
4525082
261Annotation score:
A0A287RJV7A0A287RJV7_HORVV
Uncharacterized protein
4525082
257Annotation score:
A0A287RJL6A0A287RJL6_HORVV
Uncharacterized protein
4525082
355Annotation score:
A0A287RJN9A0A287RJN9_HORVV
Uncharacterized protein
4525082
339Annotation score:
A0A287EBF0A0A287EBF0_HORVV
Uncharacterized protein
4525082
233Annotation score:

Genome annotation databases

EnsemblPlantsiHORVU0Hr1G026200.1; HORVU0Hr1G026200.1; HORVU0Hr1G026200
HORVU0Hr1G026270.1; HORVU0Hr1G026270.1; HORVU0Hr1G026270
HORVU0Hr1G026810.1; HORVU0Hr1G026810.1; HORVU0Hr1G026810
HORVU0Hr1G029960.6; HORVU0Hr1G029960.6; HORVU0Hr1G029960
HORVU0Hr1G032930.1; HORVU0Hr1G032930.1; HORVU0Hr1G032930
HORVU0Hr1G033440.1; HORVU0Hr1G033440.1; HORVU0Hr1G033440
HORVU0Hr1G033710.1; HORVU0Hr1G033710.1; HORVU0Hr1G033710
HORVU0Hr1G036980.1; HORVU0Hr1G036980.1; HORVU0Hr1G036980
HORVU0Hr1G037950.1; HORVU0Hr1G037950.1; HORVU0Hr1G037950
HORVU5Hr1G064730.1; HORVU5Hr1G064730.1; HORVU5Hr1G064730
HORVU6Hr1G037250.1; HORVU6Hr1G037250.1; HORVU6Hr1G037250
HORVU6Hr1G049440.6; HORVU6Hr1G049440.6; HORVU6Hr1G049440
GrameneiHORVU0Hr1G026200.1; HORVU0Hr1G026200.1; HORVU0Hr1G026200
HORVU0Hr1G026270.1; HORVU0Hr1G026270.1; HORVU0Hr1G026270
HORVU0Hr1G026810.1; HORVU0Hr1G026810.1; HORVU0Hr1G026810
HORVU0Hr1G029960.6; HORVU0Hr1G029960.6; HORVU0Hr1G029960
HORVU0Hr1G032930.1; HORVU0Hr1G032930.1; HORVU0Hr1G032930
HORVU0Hr1G033440.1; HORVU0Hr1G033440.1; HORVU0Hr1G033440
HORVU0Hr1G033710.1; HORVU0Hr1G033710.1; HORVU0Hr1G033710
HORVU0Hr1G036980.1; HORVU0Hr1G036980.1; HORVU0Hr1G036980
HORVU0Hr1G037950.1; HORVU0Hr1G037950.1; HORVU0Hr1G037950
HORVU5Hr1G064730.1; HORVU5Hr1G064730.1; HORVU5Hr1G064730
HORVU6Hr1G037250.1; HORVU6Hr1G037250.1; HORVU6Hr1G037250
HORVU6Hr1G049440.6; HORVU6Hr1G049440.6; HORVU6Hr1G049440

Similar proteinsi

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiHORVU0Hr1G026200.1; HORVU0Hr1G026200.1; HORVU0Hr1G026200
HORVU0Hr1G026270.1; HORVU0Hr1G026270.1; HORVU0Hr1G026270
HORVU0Hr1G026810.1; HORVU0Hr1G026810.1; HORVU0Hr1G026810
HORVU0Hr1G029960.6; HORVU0Hr1G029960.6; HORVU0Hr1G029960
HORVU0Hr1G032930.1; HORVU0Hr1G032930.1; HORVU0Hr1G032930
HORVU0Hr1G033440.1; HORVU0Hr1G033440.1; HORVU0Hr1G033440
HORVU0Hr1G033710.1; HORVU0Hr1G033710.1; HORVU0Hr1G033710
HORVU0Hr1G036980.1; HORVU0Hr1G036980.1; HORVU0Hr1G036980
HORVU0Hr1G037950.1; HORVU0Hr1G037950.1; HORVU0Hr1G037950
HORVU5Hr1G064730.1; HORVU5Hr1G064730.1; HORVU5Hr1G064730
HORVU6Hr1G037250.1; HORVU6Hr1G037250.1; HORVU6Hr1G037250
HORVU6Hr1G049440.6; HORVU6Hr1G049440.6; HORVU6Hr1G049440
GrameneiHORVU0Hr1G026200.1; HORVU0Hr1G026200.1; HORVU0Hr1G026200
HORVU0Hr1G026270.1; HORVU0Hr1G026270.1; HORVU0Hr1G026270
HORVU0Hr1G026810.1; HORVU0Hr1G026810.1; HORVU0Hr1G026810
HORVU0Hr1G029960.6; HORVU0Hr1G029960.6; HORVU0Hr1G029960
HORVU0Hr1G032930.1; HORVU0Hr1G032930.1; HORVU0Hr1G032930
HORVU0Hr1G033440.1; HORVU0Hr1G033440.1; HORVU0Hr1G033440
HORVU0Hr1G033710.1; HORVU0Hr1G033710.1; HORVU0Hr1G033710
HORVU0Hr1G036980.1; HORVU0Hr1G036980.1; HORVU0Hr1G036980
HORVU0Hr1G037950.1; HORVU0Hr1G037950.1; HORVU0Hr1G037950
HORVU5Hr1G064730.1; HORVU5Hr1G064730.1; HORVU5Hr1G064730
HORVU6Hr1G037250.1; HORVU6Hr1G037250.1; HORVU6Hr1G037250
HORVU6Hr1G049440.6; HORVU6Hr1G049440.6; HORVU6Hr1G049440

Family and domain databases

CDDicd04451 S1_IF1, 1 hit
HAMAPiMF_00075 IF_1, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR006196 RNA-binding_domain_S1_IF1
IPR022967 S1_dom
IPR004368 TIF_IF1
PANTHERiPTHR33370 PTHR33370, 1 hit
PfamiView protein in Pfam
PF01176 eIF-1a, 1 hit
SMARTiView protein in SMART
SM00316 S1, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00008 infA, 1 hit
PROSITEiView protein in PROSITE
PS50832 S1_IF1_TYPE, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A287TY42_HORVV
AccessioniPrimary (citable) accession number: A0A287TY42
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2017
Last sequence update: November 22, 2017
Last modified: March 28, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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