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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Hordeum vulgare subsp. vulgare (Domesticated barley)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiHordeum vulgare subsp. vulgare (Domesticated barley)Imported
Taxonomic identifieri112509 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum
Proteomesi
  • UP000011116 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati101 – 136PPRPROSITE-ProRule annotationAdd BLAST36
Repeati137 – 171PPRPROSITE-ProRule annotationAdd BLAST35
Repeati172 – 206PPRPROSITE-ProRule annotationAdd BLAST35
Repeati207 – 241PPRPROSITE-ProRule annotationAdd BLAST35
Repeati242 – 276PPRPROSITE-ProRule annotationAdd BLAST35
Repeati315 – 349PPRPROSITE-ProRule annotationAdd BLAST35
Repeati350 – 381PPRPROSITE-ProRule annotationAdd BLAST32
Repeati385 – 419PPRPROSITE-ProRule annotationAdd BLAST35
Repeati420 – 450PPRPROSITE-ProRule annotationAdd BLAST31
Repeati454 – 488PPRPROSITE-ProRule annotationAdd BLAST35
Repeati489 – 523PPRPROSITE-ProRule annotationAdd BLAST35
Repeati603 – 637PPRPROSITE-ProRule annotationAdd BLAST35
Repeati638 – 672PPRPROSITE-ProRule annotationAdd BLAST35

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili364 – 384Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Gene3Di1.25.40.10, 5 hits
InterProiView protein in InterPro
IPR002885 Pentatricopeptide_repeat
IPR011990 TPR-like_helical_dom_sf
PfamiView protein in Pfam
PF01535 PPR, 2 hits
PF13041 PPR_2, 2 hits
TIGRFAMsiTIGR00756 PPR, 6 hits
PROSITEiView protein in PROSITE
PS51375 PPR, 13 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All

A0A287TEB5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
RFRGMDLDAV SSRILLNSLV DASFHDLADS FARNLAASPV ATCIRIKSLC
60 70 80 90 100
RRALFRDATA LLDTLPFAEA SRGPAAGSIV TEFCRRGRFG EAAQIVGKFS
110 120 130 140 150
SCDVYGAWIH GLIEAGMLDT TLQFLSDKKE AEGYIPDGQR YDKLVHRLLR
160 170 180 190 200
KNRLGEVYDL LVEMMEEGIA PGRSTMNAAL CFFCKAGLVE VAMHLYRSRM
210 220 230 240 250
ELGVNPNKDV YNNLIRALCR GGATEEACLV LEQSMEDGYF PGRQTFAMFA
260 270 280 290 300
NVLCQEGKLD KVRELLDRAL KQEAWPMDSV LAKYVVALCK SGNVEEACTV
310 320 330 340 350
PQIASSKNPA GLYRYESTYK SLIRALILIR RVDVLPRLIL EMQDMGHIPT
360 370 380 390 400
RSLYQSVVCE LCELNRYGEV LELLENQLRR SELQPRVCYN YFISGAGHAK
410 420 430 440 450
KADVAREVYS RMESAGIEPS VESNILLLMS YLRSKRIGDA LHFFNCIHEK
460 470 480 490 500
KPPGTKMYNV FISGLCEARK PEQAMVFWRE ARDKGLIPSI SCYEQLVLLL
510 520 530 540 550
SSVQDYDSVV KIIDDFRETG RPVSAFLCNV LLLHTLRGSD LLKAWARSED
560 570 580 590 600
KSGSIEARAG EIKGRGAGRF LIGQLIELFA SGIRNRSDLE VLEEGLEQFF
610 620 630 640 650
PVDIYTYNML LRGLSMAGRM DSACNMFERL CQRGYLPNRY TFDIMVHGFC
660 670 680 690
KHGSRSEAER WMEAMYRNGF YPTWYTMRLY NNTSLRPHDQ KAISFV
Length:696
Mass (Da):78,714
Last modified:November 22, 2017 - v1
Checksum:i9DB7C2A264AC9A5B
GO

Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A287TEC0A0A287TEC0_HORVV
Uncharacterized protein
709Annotation score:
A0A287TEM6A0A287TEM6_HORVV
Uncharacterized protein
799Annotation score:
A0A287TE90A0A287TE90_HORVV
Uncharacterized protein
909Annotation score:
A0A287TEN1A0A287TEN1_HORVV
Uncharacterized protein
724Annotation score:
A0A287TEA3A0A287TEA3_HORVV
Uncharacterized protein
423Annotation score:

Genome annotation databases

EnsemblPlantsiHORVU6Hr1G015100.12; HORVU6Hr1G015100.12; HORVU6Hr1G015100
GrameneiHORVU6Hr1G015100.12; HORVU6Hr1G015100.12; HORVU6Hr1G015100

Similar proteinsi

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiHORVU6Hr1G015100.12; HORVU6Hr1G015100.12; HORVU6Hr1G015100
GrameneiHORVU6Hr1G015100.12; HORVU6Hr1G015100.12; HORVU6Hr1G015100

Family and domain databases

Gene3Di1.25.40.10, 5 hits
InterProiView protein in InterPro
IPR002885 Pentatricopeptide_repeat
IPR011990 TPR-like_helical_dom_sf
PfamiView protein in Pfam
PF01535 PPR, 2 hits
PF13041 PPR_2, 2 hits
TIGRFAMsiTIGR00756 PPR, 6 hits
PROSITEiView protein in PROSITE
PS51375 PPR, 13 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A287TEB5_HORVV
AccessioniPrimary (citable) accession number: A0A287TEB5
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2017
Last sequence update: November 22, 2017
Last modified: February 28, 2018
This is version 3 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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