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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Hordeum vulgare subsp. vulgare (Domesticated barley)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiHordeum vulgare subsp. vulgare (Domesticated barley)Imported
Taxonomic identifieri112509 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum
Proteomesi
  • UP000011116 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati186 – 220PPRPROSITE-ProRule annotationAdd BLAST35
Repeati314 – 349PPRPROSITE-ProRule annotationAdd BLAST36
Repeati350 – 384PPRPROSITE-ProRule annotationAdd BLAST35
Repeati385 – 419PPRPROSITE-ProRule annotationAdd BLAST35
Repeati420 – 454PPRPROSITE-ProRule annotationAdd BLAST35
Repeati455 – 489PPRPROSITE-ProRule annotationAdd BLAST35
Repeati528 – 562PPRPROSITE-ProRule annotationAdd BLAST35
Repeati563 – 594PPRPROSITE-ProRule annotationAdd BLAST32
Repeati598 – 632PPRPROSITE-ProRule annotationAdd BLAST35
Repeati633 – 663PPRPROSITE-ProRule annotationAdd BLAST31
Repeati667 – 701PPRPROSITE-ProRule annotationAdd BLAST35
Repeati702 – 736PPRPROSITE-ProRule annotationAdd BLAST35
Repeati816 – 850PPRPROSITE-ProRule annotationAdd BLAST35
Repeati851 – 885PPRPROSITE-ProRule annotationAdd BLAST35

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili577 – 597Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Gene3Di1.25.40.10, 4 hits
InterProiView protein in InterPro
IPR002885 Pentatricopeptide_repeat
IPR011990 TPR-like_helical_dom_sf
PfamiView protein in Pfam
PF01535 PPR, 3 hits
PF13041 PPR_2, 2 hits
TIGRFAMsiTIGR00756 PPR, 6 hits
PROSITEiView protein in PROSITE
PS51375 PPR, 14 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All

A0A287TE90-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPRLLAPLPS RSRRRRLLAI LSNTFSASTA SPHRAPPPPP PPLPQLSPLL
60 70 80 90 100
PRTAESYASI SDAASDIAVS FRDWFLAPPR AAEPLTALDA IYEALASDDA
110 120 130 140 150
AALEALPLSE ELVLSVLRHR PRRLPDGDAV LLLRLKFFDW SGRRPQYLHT
160 170 180 190 200
RAVYHAVFRL LSRARRASVV LDWLRLFAAT SASTGQPRFH QTLVVGYAVA
210 220 230 240 250
GDPQRGLSVL GRMRFRGMDL DAVSSRILLN SLVDASFHDL ADSFARNLAA
260 270 280 290 300
SPVATCIRIK SLCRRALFRD ATALLDTLPF AEASRGPAAG SIVTEFCRRG
310 320 330 340 350
RFGEAAQIVG KFSSCDVYGA WIHGLIEAGM LDTTLQFLSD KKEAEGYIPD
360 370 380 390 400
GQRYDKLVHR LLRKNRLGEV YDLLVEMMEE GIAPGRSTMN AALCFFCKAG
410 420 430 440 450
LVEVAMHLYR SRMELGVNPN KDVYNNLIRA LCRGGATEEA CLVLEQSMED
460 470 480 490 500
GYFPGRQTFA MFANVLCQEG KLDKVRELLD RALKQEAWPM DSVLAKYVVA
510 520 530 540 550
LCKSGNVEEA CTVPQIASSK NPAGLYRYES TYKSLIRALI LIRRVDVLPR
560 570 580 590 600
LILEMQDMGH IPTRSLYQSV VCELCELNRY GEVLELLENQ LRRSELQPRV
610 620 630 640 650
CYNYFISGAG HAKKADVARE VYSRMESAGI EPSVESNILL LMSYLRSKRI
660 670 680 690 700
GDALHFFNCI HEKKPPGTKM YNVFISGLCE ARKPEQAMVF WREARDKGLI
710 720 730 740 750
PSISCYEQLV LLLSSVQDYD SVVKIIDDFR ETGRPVSAFL CNVLLLHTLR
760 770 780 790 800
GSDLLKAWAR SEDKSGSIEA RAGEIKGRGA GRFLIGQLIE LFASGIRNRS
810 820 830 840 850
DLEVLEEGLE QFFPVDIYTY NMLLRGLSMA GRMDSACNMF ERLCQRGYLP
860 870 880 890 900
NRYTFDIMVH GFCKHGSRSE AERWMEAMYR NGFYPTWYTM RLYNNTSLRP

HDQKAISFV
Length:909
Mass (Da):102,162
Last modified:November 22, 2017 - v1
Checksum:iC5D3E4FC84CC16F9
GO

Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A287TEC0A0A287TEC0_HORVV
Uncharacterized protein
709Annotation score:
A0A287TEM6A0A287TEM6_HORVV
Uncharacterized protein
799Annotation score:
A0A287TEB5A0A287TEB5_HORVV
Uncharacterized protein
696Annotation score:
A0A287TEN1A0A287TEN1_HORVV
Uncharacterized protein
724Annotation score:
A0A287TEA3A0A287TEA3_HORVV
Uncharacterized protein
423Annotation score:

Genome annotation databases

EnsemblPlantsiHORVU6Hr1G015100.1; HORVU6Hr1G015100.1; HORVU6Hr1G015100
HORVU6Hr1G015100.10; HORVU6Hr1G015100.10; HORVU6Hr1G015100
HORVU6Hr1G015100.2; HORVU6Hr1G015100.2; HORVU6Hr1G015100
HORVU6Hr1G015100.5; HORVU6Hr1G015100.5; HORVU6Hr1G015100
GrameneiHORVU6Hr1G015100.1; HORVU6Hr1G015100.1; HORVU6Hr1G015100
HORVU6Hr1G015100.10; HORVU6Hr1G015100.10; HORVU6Hr1G015100
HORVU6Hr1G015100.2; HORVU6Hr1G015100.2; HORVU6Hr1G015100
HORVU6Hr1G015100.5; HORVU6Hr1G015100.5; HORVU6Hr1G015100

Similar proteinsi

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiHORVU6Hr1G015100.1; HORVU6Hr1G015100.1; HORVU6Hr1G015100
HORVU6Hr1G015100.10; HORVU6Hr1G015100.10; HORVU6Hr1G015100
HORVU6Hr1G015100.2; HORVU6Hr1G015100.2; HORVU6Hr1G015100
HORVU6Hr1G015100.5; HORVU6Hr1G015100.5; HORVU6Hr1G015100
GrameneiHORVU6Hr1G015100.1; HORVU6Hr1G015100.1; HORVU6Hr1G015100
HORVU6Hr1G015100.10; HORVU6Hr1G015100.10; HORVU6Hr1G015100
HORVU6Hr1G015100.2; HORVU6Hr1G015100.2; HORVU6Hr1G015100
HORVU6Hr1G015100.5; HORVU6Hr1G015100.5; HORVU6Hr1G015100

Family and domain databases

Gene3Di1.25.40.10, 4 hits
InterProiView protein in InterPro
IPR002885 Pentatricopeptide_repeat
IPR011990 TPR-like_helical_dom_sf
PfamiView protein in Pfam
PF01535 PPR, 3 hits
PF13041 PPR_2, 2 hits
TIGRFAMsiTIGR00756 PPR, 6 hits
PROSITEiView protein in PROSITE
PS51375 PPR, 14 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A287TE90_HORVV
AccessioniPrimary (citable) accession number: A0A287TE90
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2017
Last sequence update: November 22, 2017
Last modified: February 28, 2018
This is version 3 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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