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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Hordeum vulgare subsp. vulgare (Domesticated barley)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiHordeum vulgare subsp. vulgare (Domesticated barley)Imported
Taxonomic identifieri112509 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum
Proteomesi
  • UP000011116 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini99 – 121C2H2-typeInterPro annotationAdd BLAST23
Domaini177 – 205C2H2-typeInterPro annotationAdd BLAST29

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Family and domain databases

InterProiView protein in InterPro
IPR002182 NB-ARC
IPR027417 P-loop_NTPase
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00931 NB-ARC, 1 hit
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 3 hits
SUPFAMiSSF52540 SSF52540, 1 hit
SSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 1 hit
PS50157 ZINC_FINGER_C2H2_2, 2 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 10 potential isoforms that are computationally mapped.iShow all

A0A287SHK5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEGGRKTKTY RPQSPPPPPR PPFAAMGWGA DKGQLDRELG GAAAAAPDRP
60 70 80 90 100
GMPPNPTEPE AAAASAPTKK KWTLPGKRDE DVEVVALSPG TLMASNSRFI
110 120 130 140 150
CEVCGQGFQR DQNLQLHRRG HNLPWRLRQR GPGAAPPLRR VYVCPEPGCV
160 170 180 190 200
HHSPAHALGD LMGIKKHFCR KHGEKRWACP RCGKRYAVQA DLKGHAKICS
210 220 230 240 250
TREYRCDCGT LFTRRDSFVT HRAFCDALVD VDKTAGSVLT VEENVDKDES
260 270 280 290 300
ETSAVDKDES ETSAVAKVDE PQPQPILPQV QQPDLDGMLL LVPVCALADA
310 320 330 340 350
MFRLPAKLDR LLASHGHNLP RGAKEEIPLI KQDLQETVAS VQEYDDSGGD
360 370 380 390 400
GRSMMAKCLT KEVRELSYDM EDTADQYEHA ACIRKGIAPR RKKYKVSRRR
410 420 430 440 450
SKATSGLQEK LKWRLWMANK IRELSLRSQE ALRRCSLFNH LGSNVITDLA
460 470 480 490 500
IGGTSNNACP RRVVSFGSWH PMPYVCMDEH VNKLESLLGK DGEQKLKVVC
510 520 530 540 550
LVGSGGIGKT TLAKELYRRI KGQFECQAFV RTSRKPDVRS LLSSMLSQIQ
560 570 580 590 600
PHHSTHNWKV HSLIADIRTH LQDKRYLIVI DDVWATQTWD IIVNALPDGN
610 620 630 640 650
LCSGILMTTE VDDVALKCCG YEPKYVHTMK PLGHDDSSKL FFSTAFGAQH
660 670 680 690 700
DCPPELSEVA NNIIRKCDGL PLAVVTVAGL LVNQGKPEQW DYVNKSLGYG
710 720 730 740 750
LRTNPNSEGM KQVLNLSYNN LPQHLKACMM YLSIYEENYM IWKDDLLKQW
760 770 780 790 800
IAEGLIRANG EKDMEEISRI CFDELVNSRM IQPVHINDND DVLSCTVHHM
810 820 830 840 850
VLDFIKHKSL EENFVTAVDH CQTTAWLADK VRRLSLHFGN AEAMPPTNMI
860 870 880 890 900
LSQVRTLAFF GAIKCLPSIV EFGFLQILIL HLWGNDESIS VDLTGISELF
910 920 930 940
RLKYLHVTCN GTLELEVPHN QMRGLQYLET LKIDARVSAV P
Length:941
Mass (Da):105,331
Last modified:November 22, 2017 - v1
Checksum:i625357F34CCB3C6C
GO

Computationally mapped potential isoform sequencesi

There are 10 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A287SHD7A0A287SHD7_HORVV
Uncharacterized protein
579Annotation score:
A0A287SHJ8A0A287SHJ8_HORVV
Uncharacterized protein
876Annotation score:
A0A287SHH7A0A287SHH7_HORVV
Uncharacterized protein
871Annotation score:
A0A287SHE7A0A287SHE7_HORVV
Uncharacterized protein
400Annotation score:
A0A287SHE1A0A287SHE1_HORVV
Uncharacterized protein
755Annotation score:
A0A287SHL0A0A287SHL0_HORVV
Uncharacterized protein
940Annotation score:
A0A287SHH2A0A287SHH2_HORVV
Uncharacterized protein
968Annotation score:
A0A287SHK0A0A287SHK0_HORVV
Uncharacterized protein
31Annotation score:
A0A287SHK3A0A287SHK3_HORVV
Uncharacterized protein
296Annotation score:
A0A287SHF2A0A287SHF2_HORVV
Uncharacterized protein
363Annotation score:

Genome annotation databases

EnsemblPlantsiHORVU5Hr1G099940.4; HORVU5Hr1G099940.4; HORVU5Hr1G099940
GrameneiHORVU5Hr1G099940.4; HORVU5Hr1G099940.4; HORVU5Hr1G099940

Similar proteinsi

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiHORVU5Hr1G099940.4; HORVU5Hr1G099940.4; HORVU5Hr1G099940
GrameneiHORVU5Hr1G099940.4; HORVU5Hr1G099940.4; HORVU5Hr1G099940

Family and domain databases

InterProiView protein in InterPro
IPR002182 NB-ARC
IPR027417 P-loop_NTPase
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00931 NB-ARC, 1 hit
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 3 hits
SUPFAMiSSF52540 SSF52540, 1 hit
SSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 1 hit
PS50157 ZINC_FINGER_C2H2_2, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A287SHK5_HORVV
AccessioniPrimary (citable) accession number: A0A287SHK5
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2017
Last sequence update: November 22, 2017
Last modified: February 28, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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