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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Hordeum vulgare subsp. vulgare (Domesticated barley)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi197 – 282TF-B3PROSITE-ProRule annotationAdd BLAST86

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiHordeum vulgare subsp. vulgare (Domesticated barley)Imported
Taxonomic identifieri112509 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum
Proteomesi
  • UP000011116 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini197 – 282TF-B3InterPro annotationAdd BLAST86

Family and domain databases

CDDicd10017 B3_DNA, 1 hit
Gene3Di2.40.330.10, 1 hit
InterProiView protein in InterPro
IPR003340 B3_DNA-bd
IPR015300 DNA-bd_pseudobarrel_sf
IPR039218 REM_fam
PANTHERiPTHR31674 PTHR31674, 1 hit
PfamiView protein in Pfam
PF02362 B3, 1 hit
SMARTiView protein in SMART
SM01019 B3, 1 hit
SUPFAMiSSF101936 SSF101936, 1 hit
PROSITEiView protein in PROSITE
PS50863 B3, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 6 potential isoforms that are computationally mapped.iShow all

A0A287RWQ4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
VQSIKVDQGG SWFHLADSMA VRDAFRFQGI NERWHLQVDA SLQVDQGMAT
60 70 80 90 100
QGHSGGASSA NHSAPAPGRH GYQGSSSRMR SSSETLPDHV EAEAEVNPTE
110 120 130 140 150
SEREQPLSAK GERSSNGAEK DREQGTWKRR LRHRTQVGKT RITLSSNNSS
160 170 180 190 200
RSSSESEEMD MNTVDAPAPA PTRNAATPQF VVELKKCHFA KRSGQYLNVP
210 220 230 240 250
RAFSKAHGYT ETKKVVLRMG GKSWSVNLKH GLNSSGMART SLRYGWHQFC
260 270 280 290
VDNRLCVDET CFFRALPGGG GGDRHVHELK VEVRRLDGSY TS
Length:292
Mass (Da):32,225
Last modified:November 22, 2017 - v1
Checksum:i6D22DBDE3660D3CF
GO

Computationally mapped potential isoform sequencesi

There are 6 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A287RWZ4A0A287RWZ4_HORVV
Uncharacterized protein
302Annotation score:
A0A287RX61A0A287RX61_HORVV
Uncharacterized protein
344Annotation score:
A0A287RX23A0A287RX23_HORVV
Uncharacterized protein
86Annotation score:
A0A287RWY7A0A287RWY7_HORVV
Uncharacterized protein
344Annotation score:
A0A287RWP9A0A287RWP9_HORVV
Uncharacterized protein
418Annotation score:
A0A287RX66A0A287RX66_HORVV
Uncharacterized protein
344Annotation score:

Genome annotation databases

EnsemblPlantsiHORVU5Hr1G078160.7; HORVU5Hr1G078160.7; HORVU5Hr1G078160
GrameneiHORVU5Hr1G078160.7; HORVU5Hr1G078160.7; HORVU5Hr1G078160

Similar proteinsi

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiHORVU5Hr1G078160.7; HORVU5Hr1G078160.7; HORVU5Hr1G078160
GrameneiHORVU5Hr1G078160.7; HORVU5Hr1G078160.7; HORVU5Hr1G078160

Family and domain databases

CDDicd10017 B3_DNA, 1 hit
Gene3Di2.40.330.10, 1 hit
InterProiView protein in InterPro
IPR003340 B3_DNA-bd
IPR015300 DNA-bd_pseudobarrel_sf
IPR039218 REM_fam
PANTHERiPTHR31674 PTHR31674, 1 hit
PfamiView protein in Pfam
PF02362 B3, 1 hit
SMARTiView protein in SMART
SM01019 B3, 1 hit
SUPFAMiSSF101936 SSF101936, 1 hit
PROSITEiView protein in PROSITE
PS50863 B3, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A287RWQ4_HORVV
AccessioniPrimary (citable) accession number: A0A287RWQ4
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2017
Last sequence update: November 22, 2017
Last modified: July 18, 2018
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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