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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Hordeum vulgare subsp. vulgare (Domesticated barley)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiHordeum vulgare subsp. vulgare (Domesticated barley)Imported
Taxonomic identifieri112509 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum
Proteomesi
  • UP000011116 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei44 – 67HelicalSequence analysisAdd BLAST24
Transmembranei99 – 116HelicalSequence analysisAdd BLAST18
Transmembranei128 – 145HelicalSequence analysisAdd BLAST18
Transmembranei182 – 210HelicalSequence analysisAdd BLAST29
Transmembranei329 – 352HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini135 – 272FA_hydroxylaseInterPro annotationAdd BLAST138
Domaini454 – 617Wax2_CInterPro annotationAdd BLAST164

Sequence similaritiesi

Belongs to the sterol desaturase family.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR006694 Fatty_acid_hydroxylase
IPR021940 Uncharacterised_Wax2_C
PfamiView protein in Pfam
PF04116 FA_hydroxylase, 1 hit
PF12076 Wax2_C, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 10 potential isoforms that are computationally mapped.iShow all

A0A287IUT7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MATRPGPLTE WPWQWMGSFK YLVLAPAALH TAHRLVTKGW GDMNLAYATM
60 70 80 90 100
LPALLLRMIH NQIWISLSRH QTARRKHIIV DRSLEFDQVD RESSWDDQII
110 120 130 140 150
FNGLFFYLAY VAVPNVSQMP VWRTEGVIIT ALLHIGPVEF LYYWFHRALH
160 170 180 190 200
HHFLYSRYHS HHHASIVTEP ITSVIHPFAE QVVYFLLFSI PTMTPTFMGC
210 220 230 240 250
GSVLAVVLYI TYIDFMNNMG HCNFELVPKR FFHAFPPLKY LMYTPSFHSL
260 270 280 290 300
HHTQFRTNYS LFMPFYDYIY NTMDNSTDEL YERTLKGTEE TPDLVHLTHM
310 320 330 340 350
TNLRSTYHLR VGIASIASRP SDNPVWYMWM IWPVAWLSMV LAWVYGSSAF
360 370 380 390 400
VVESLNLKKF KMQTWAIPRY NFHYGFIWQR KSINSLIEKA ILDADGRGVR
410 420 430 440 450
VLSLGLLNQA AKQLNGSGEL FTQKYPKLRV RLVDGSGLAT AVVLKSIPLG
460 470 480 490 500
TKQVFLCRSS SKLAHATATA LCERGVQVVI MNQKKEYDML KSRVPENSTV
510 520 530 540 550
YLKFSSDEIP QIWIGDNIDD KQQRRAPSGT IFIPTSHFPL KKTRKDCTYL
560 570 580 590 600
STPAMKIPEA MQNVHTCENW LPRRVMSAWR IAGIIHAQEG WNMHECGDDM
610 620
MDIEKVWSAA IRHGFIPLSK A
Length:621
Mass (Da):71,775
Last modified:November 22, 2017 - v1
Checksum:iC2678407B77F27C9
GO

Computationally mapped potential isoform sequencesi

There are 10 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A287IUU7A0A287IUU7_HORVV
Uncharacterized protein
296Annotation score:
A0A287IUV1A0A287IUV1_HORVV
Uncharacterized protein
419Annotation score:
A0A287IV07A0A287IV07_HORVV
Uncharacterized protein
450Annotation score:
A0A287IUU2A0A287IUU2_HORVV
Uncharacterized protein
477Annotation score:
A0A287IUX8A0A287IUX8_HORVV
Uncharacterized protein
344Annotation score:
A0A287IUU6A0A287IUU6_HORVV
Uncharacterized protein
620Annotation score:
A0A287IUZ5A0A287IUZ5_HORVV
Uncharacterized protein
619Annotation score:
A0A287IV04A0A287IV04_HORVV
Uncharacterized protein
418Annotation score:
A0A287IV00A0A287IV00_HORVV
Uncharacterized protein
357Annotation score:
A0A287IUY3A0A287IUY3_HORVV
Uncharacterized protein
387Annotation score:

Genome annotation databases

EnsemblPlantsiHORVU2Hr1G088860.1; HORVU2Hr1G088860.1; HORVU2Hr1G088860
GrameneiHORVU2Hr1G088860.1; HORVU2Hr1G088860.1; HORVU2Hr1G088860

Similar proteinsi

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiHORVU2Hr1G088860.1; HORVU2Hr1G088860.1; HORVU2Hr1G088860
GrameneiHORVU2Hr1G088860.1; HORVU2Hr1G088860.1; HORVU2Hr1G088860

Family and domain databases

InterProiView protein in InterPro
IPR006694 Fatty_acid_hydroxylase
IPR021940 Uncharacterised_Wax2_C
PfamiView protein in Pfam
PF04116 FA_hydroxylase, 1 hit
PF12076 Wax2_C, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A287IUT7_HORVV
AccessioniPrimary (citable) accession number: A0A287IUT7
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2017
Last sequence update: November 22, 2017
Last modified: January 31, 2018
This is version 3 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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