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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Hordeum vulgare subsp. vulgare (Domesticated barley)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiHordeum vulgare subsp. vulgare (Domesticated barley)Imported
Taxonomic identifieri112509 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum
Proteomesi
  • UP000011116 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati15 – 49PPRPROSITE-ProRule annotationAdd BLAST35
Repeati90 – 120PPRPROSITE-ProRule annotationAdd BLAST31
Repeati121 – 155PPRPROSITE-ProRule annotationAdd BLAST35
Repeati156 – 190PPRPROSITE-ProRule annotationAdd BLAST35
Repeati191 – 221PPRPROSITE-ProRule annotationAdd BLAST31
Repeati222 – 256PPRPROSITE-ProRule annotationAdd BLAST35
Repeati292 – 322PPRPROSITE-ProRule annotationAdd BLAST31
Repeati323 – 357PPRPROSITE-ProRule annotationAdd BLAST35
Repeati393 – 423PPRPROSITE-ProRule annotationAdd BLAST31
Repeati424 – 458PPRPROSITE-ProRule annotationAdd BLAST35
Repeati459 – 494PPRPROSITE-ProRule annotationAdd BLAST36
Repeati495 – 525PPRPROSITE-ProRule annotationAdd BLAST31

Family and domain databases

Gene3Di1.25.40.10, 4 hits
InterProiView protein in InterPro
IPR002885 Pentatricopeptide_repeat
IPR011990 TPR-like_helical_dom_sf
PfamiView protein in Pfam
PF01535 PPR, 7 hits
PF13041 PPR_2, 2 hits
TIGRFAMsiTIGR00756 PPR, 8 hits
PROSITEiView protein in PROSITE
PS51375 PPR, 12 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 13 potential isoforms that are computationally mapped.iShow all

A0A287HHC8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
TGHALRVLDG MPRRNSFAWN AAIKGLVDAG RFSEALETYR AMVDDGSVAA
60 70 80 90 100
DGFTYPPVIK ACAVLGAVEQ GRVIRDHVEA GVASGDATPN VFVQCALVNM
110 120 130 140 150
FAKCGCLGEA RSVFESMQEK DVVAWTAMIG GAVHAGDWLD AMCLFNRMRS
160 170 180 190 200
EGFSADSVII ATVIPACGRV KELRAGTALH GCAVRCGVAD DNCVSNALVD
210 220 230 240 250
MYCKCGCLEM ADYLFRSIYF KDVVSWSTLI AGYSQNGMYH MSVSLFTEMV
260 270 280 290 300
AAGLKPNSNT MASILPSLSG LKLFRHGKEV HGFSLRYGLD QSKFLGSAFI
310 320 330 340 350
DFYSRQGFLR EAATVFELIP KKDLVIWNSV VAAYGVNGDT DSALCAFRAL
360 370 380 390 400
QKAGFKPDHV TVISALPVCN HHSRLIQGKA LHAYVVRRYM SSICSVCNAL
410 420 430 440 450
IDMYCKCCCL EKGKDIFQLM TERDTATYNT LISSLGKHGH EDQAIMLFDQ
460 470 480 490 500
MKRDGIAPDK VTFVALLSCC SHAGLTEKGL HFYNSMLQDY NISPDKEHYS
510 520 530 540 550
CVVDLYSRSG KLDDAWKFIS SLREGTEIDV LGCLLAACRV HNRMDIAELV
560 570 580 590 600
AERIFEKNPS DPGYHILLSN IYADAGMWSD VTKIRTIIEE RSLKNKTGNS

LI
Length:602
Mass (Da):66,022
Last modified:November 22, 2017 - v1
Checksum:iB2DE213AD1975810
GO

Computationally mapped potential isoform sequencesi

There are 13 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A287HHE3A0A287HHE3_HORVV
Uncharacterized protein
610Annotation score:
A0A287HHH6A0A287HHH6_HORVV
Uncharacterized protein
548Annotation score:
A0A287HHG6A0A287HHG6_HORVV
Uncharacterized protein
592Annotation score:
A0A287HH17A0A287HH17_HORVV
Uncharacterized protein
398Annotation score:
A0A287HHI2A0A287HHI2_HORVV
Uncharacterized protein
268Annotation score:
A0A287HH23A0A287HH23_HORVV
Uncharacterized protein
604Annotation score:
A0A287HHH1A0A287HHH1_HORVV
Uncharacterized protein
614Annotation score:
A0A287HH29A0A287HH29_HORVV
Uncharacterized protein
605Annotation score:
A0A287HH72A0A287HH72_HORVV
Uncharacterized protein
599Annotation score:
A0A287HHD8A0A287HHD8_HORVV
Uncharacterized protein
250Annotation score:
There are more potential isoformsShow all

Genome annotation databases

EnsemblPlantsiHORVU2Hr1G027440.1; HORVU2Hr1G027440.1; HORVU2Hr1G027440
HORVU2Hr1G027440.2; HORVU2Hr1G027440.2; HORVU2Hr1G027440
GrameneiHORVU2Hr1G027440.1; HORVU2Hr1G027440.1; HORVU2Hr1G027440
HORVU2Hr1G027440.2; HORVU2Hr1G027440.2; HORVU2Hr1G027440

Similar proteinsi

Entry informationi

Entry nameiA0A287HHC8_HORVV
AccessioniPrimary (citable) accession number: A0A287HHC8
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2017
Last sequence update: November 22, 2017
Last modified: February 28, 2018
This is version 3 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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