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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Hordeum vulgare subsp. vulgare (Domesticated barley)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiHordeum vulgare subsp. vulgare (Domesticated barley)Imported
Taxonomic identifieri112509 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum
Proteomesi
  • UP000011116 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati17 – 51PPRPROSITE-ProRule annotationAdd BLAST35
Repeati92 – 122PPRPROSITE-ProRule annotationAdd BLAST31
Repeati123 – 157PPRPROSITE-ProRule annotationAdd BLAST35
Repeati158 – 192PPRPROSITE-ProRule annotationAdd BLAST35
Repeati193 – 223PPRPROSITE-ProRule annotationAdd BLAST31
Repeati224 – 258PPRPROSITE-ProRule annotationAdd BLAST35
Repeati294 – 324PPRPROSITE-ProRule annotationAdd BLAST31
Repeati325 – 359PPRPROSITE-ProRule annotationAdd BLAST35
Repeati395 – 425PPRPROSITE-ProRule annotationAdd BLAST31
Repeati426 – 460PPRPROSITE-ProRule annotationAdd BLAST35
Repeati461 – 496PPRPROSITE-ProRule annotationAdd BLAST36
Repeati497 – 527PPRPROSITE-ProRule annotationAdd BLAST31

Family and domain databases

Gene3Di1.25.40.10, 6 hits
InterProiView protein in InterPro
IPR002885 Pentatricopeptide_repeat
IPR011990 TPR-like_helical_dom_sf
PfamiView protein in Pfam
PF01535 PPR, 7 hits
PF13041 PPR_2, 2 hits
TIGRFAMsiTIGR00756 PPR, 8 hits
PROSITEiView protein in PROSITE
PS51375 PPR, 12 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 13 potential isoforms that are computationally mapped.iShow all

A0A287HH23-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
GQTGHALRVL DGMPRRNSFA WNAAIKGLVD AGRFSEALET YRAMVDDGSV
60 70 80 90 100
AADGFTYPPV IKACAVLGAV EQGRVIRDHV EAGVASGDAT PNVFVQCALV
110 120 130 140 150
NMFAKCGCLG EARSVFESMQ EKDVVAWTAM IGGAVHAGDW LDAMCLFNRM
160 170 180 190 200
RSEGFSADSV IIATVIPACG RVKELRAGTA LHGCAVRCGV ADDNCVSNAL
210 220 230 240 250
VDMYCKCGCL EMADYLFRSI YFKDVVSWST LIAGYSQNGM YHMSVSLFTE
260 270 280 290 300
MVAAGLKPNS NTMASILPSL SGLKLFRHGK EVHGFSLRYG LDQSKFLGSA
310 320 330 340 350
FIDFYSRQGF LREAATVFEL IPKKDLVIWN SVVAAYGVNG DTDSALCAFR
360 370 380 390 400
ALQKAGFKPD HVTVISALPV CNHHSRLIQG KALHAYVVRR YMSSICSVCN
410 420 430 440 450
ALIDMYCKCC CLEKGKDIFQ LMTERDTATY NTLISSLGKH GHEDQAIMLF
460 470 480 490 500
DQMKRDGIAP DKVTFVALLS CCSHAGLTEK GLHFYNSMLQ DYNISPDKEH
510 520 530 540 550
YSCVVDLYSR SGKLDDAWKF ISSLREGTEI DVLGCLLAAC RVHNRMDIAE
560 570 580 590 600
LVAERIFEKN PSDPGYHILL SNIYADAGMW SDVTKIRTII EERSLKNKTG

NSLI
Length:604
Mass (Da):66,207
Last modified:November 22, 2017 - v1
Checksum:i3BB83526F274E75B
GO

Computationally mapped potential isoform sequencesi

There are 13 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A287HHE3A0A287HHE3_HORVV
Uncharacterized protein
610Annotation score:
A0A287HHH6A0A287HHH6_HORVV
Uncharacterized protein
548Annotation score:
A0A287HHG6A0A287HHG6_HORVV
Uncharacterized protein
592Annotation score:
A0A287HHC8A0A287HHC8_HORVV
Uncharacterized protein
602Annotation score:
A0A287HH17A0A287HH17_HORVV
Uncharacterized protein
398Annotation score:
A0A287HHI2A0A287HHI2_HORVV
Uncharacterized protein
268Annotation score:
A0A287HHH1A0A287HHH1_HORVV
Uncharacterized protein
614Annotation score:
A0A287HH29A0A287HH29_HORVV
Uncharacterized protein
605Annotation score:
A0A287HH72A0A287HH72_HORVV
Uncharacterized protein
599Annotation score:
A0A287HHD8A0A287HHD8_HORVV
Uncharacterized protein
250Annotation score:
There are more potential isoformsShow all

Genome annotation databases

EnsemblPlantsiHORVU2Hr1G027440.16; HORVU2Hr1G027440.16; HORVU2Hr1G027440
GrameneiHORVU2Hr1G027440.16; HORVU2Hr1G027440.16; HORVU2Hr1G027440

Similar proteinsi

Entry informationi

Entry nameiA0A287HH23_HORVV
AccessioniPrimary (citable) accession number: A0A287HH23
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2017
Last sequence update: November 22, 2017
Last modified: February 28, 2018
This is version 3 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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