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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Hordeum vulgare subsp. vulgare (Domesticated barley)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiHordeum vulgare subsp. vulgare (Domesticated barley)Imported
Taxonomic identifieri112509 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum
Proteomesi
  • UP000011116 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini82 – 162LITAFInterPro annotationAdd BLAST81

Family and domain databases

InterProiView protein in InterPro
IPR006629 LITAF
IPR037519 LITAF_fam
PANTHERiPTHR23292 PTHR23292, 1 hit
PfamiView protein in Pfam
PF10601 zf-LITAF-like, 1 hit
SMARTiView protein in SMART
SM00714 LITAF, 1 hit
PROSITEiView protein in PROSITE
PS51837 LITAF, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.iShow all

A0A287H429-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XPATTMATAK ASGEEPALGI
60 70 80 90 100
PYNPAQAQGS YYYPPDPYAA GRVPPNAIYA GAPKGVPLQH TMFRDTPAPF
110 120 130 140 150
HCQSCGDAAV TSVRSKPSVA SVVACMMPFF LGVCFLCPSM DCLWHKQHYC
160 170 180
PSCGEMVAEF KKDDPCIVVD PTSWTEPSFA VPA
Length:183
Mass (Da):19,672
Last modified:November 22, 2017 - v1
Checksum:iF434CFC0BAFAFF3D
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A287H4B3A0A287H4B3_HORVV
Uncharacterized protein
153Annotation score:
A0A287H431A0A287H431_HORVV
Uncharacterized protein
113Annotation score:

Genome annotation databases

EnsemblPlantsiHORVU2Hr1G013200.2; HORVU2Hr1G013200.2; HORVU2Hr1G013200
GrameneiHORVU2Hr1G013200.2; HORVU2Hr1G013200.2; HORVU2Hr1G013200

Similar proteinsi

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiHORVU2Hr1G013200.2; HORVU2Hr1G013200.2; HORVU2Hr1G013200
GrameneiHORVU2Hr1G013200.2; HORVU2Hr1G013200.2; HORVU2Hr1G013200

Family and domain databases

InterProiView protein in InterPro
IPR006629 LITAF
IPR037519 LITAF_fam
PANTHERiPTHR23292 PTHR23292, 1 hit
PfamiView protein in Pfam
PF10601 zf-LITAF-like, 1 hit
SMARTiView protein in SMART
SM00714 LITAF, 1 hit
PROSITEiView protein in PROSITE
PS51837 LITAF, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A287H429_HORVV
AccessioniPrimary (citable) accession number: A0A287H429
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2017
Last sequence update: November 22, 2017
Last modified: December 20, 2017
This is version 2 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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