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Protein
Submitted name:

Uncharacterized protein

Gene

SLC35B3

Organism
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Keywordsi

Biological processTransportSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:SLC35B3Imported
OrganismiIctidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)Imported
Taxonomic identifieri43179 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciuromorphaSciuridaeXerinaeMarmotiniIctidomys
Proteomesi
  • UP000005215 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei49 – 67HelicalSequence analysisAdd BLAST19
Transmembranei79 – 102HelicalSequence analysisAdd BLAST24
Transmembranei114 – 135HelicalSequence analysisAdd BLAST22
Transmembranei141 – 158HelicalSequence analysisAdd BLAST18
Transmembranei165 – 183HelicalSequence analysisAdd BLAST19
Transmembranei189 – 210HelicalSequence analysisAdd BLAST22
Transmembranei230 – 253HelicalSequence analysisAdd BLAST24
Transmembranei265 – 285HelicalSequence analysisAdd BLAST21
Transmembranei292 – 314HelicalSequence analysisAdd BLAST23
Transmembranei320 – 337HelicalSequence analysisAdd BLAST18

Keywords - Cellular componenti

Membrane

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00530000063090

Family and domain databases

InterProiView protein in InterPro
IPR013657 UAA
PfamiView protein in Pfam
PF08449 UAA, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

A0A287D9J4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDLKFNNSRK YISITVPSKT QTMSPHIKSI DDIIVLGINL SKFNKLTQFF
60 70 80 90 100
ICVAGVFVFY LIYGYLQELI FSVEGFKSYG WYLTLVQFAF YSIFGLIELQ
110 120 130 140 150
LIQDKRRRIP GKTYMIIAFL TVGTMGLSNT SLGYLNYPTQ VIFKCCKLIP
160 170 180 190 200
VMLGGVFIQG KRYNVADVSA ALCMSLGLIW FTLADSTVAP NFNLTGVMLI
210 220 230 240 250
SLALCADAVI GNVQEKAMKL HNASNSEMVL YSYSIGFVYI LLGLTCTSGL
260 270 280 290 300
SPAVTFCSKN PIQTYGYAFL FSLTGYFGIS FVLALIKIFG ALVAVTVTTG
310 320 330 340 350
RKAMTIVLSF IFFAKPFTFQ YVWSGLLVVL GIFLNVYSKN MDKIRLPSPY
360
DLINKSVIVR KSRTLAQTV
Length:369
Mass (Da):41,114
Last modified:November 22, 2017 - v1
Checksum:i7D430C730976E705
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
I3LY57I3LY57_ICTTR
Uncharacterized protein
SLC35B3
405Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01048652 Genomic DNA No translation available.
AGTP01048653 Genomic DNA No translation available.
RefSeqiXP_005327537.1, XM_005327480.2
XP_013215095.1, XM_013359641.1
XP_013215096.1, XM_013359642.1

Genome annotation databases

EnsembliENSSTOT00000038224; ENSSTOP00000030204; ENSSTOG00000001201
GeneIDi101955202

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01048652 Genomic DNA No translation available.
AGTP01048653 Genomic DNA No translation available.
RefSeqiXP_005327537.1, XM_005327480.2
XP_013215095.1, XM_013359641.1
XP_013215096.1, XM_013359642.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSTOT00000038224; ENSSTOP00000030204; ENSSTOG00000001201
GeneIDi101955202

Organism-specific databases

CTDi51000

Phylogenomic databases

GeneTreeiENSGT00530000063090

Family and domain databases

InterProiView protein in InterPro
IPR013657 UAA
PfamiView protein in Pfam
PF08449 UAA, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A287D9J4_ICTTR
AccessioniPrimary (citable) accession number: A0A287D9J4
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2017
Last sequence update: November 22, 2017
Last modified: October 10, 2018
This is version 6 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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