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Protein
Submitted name:

Uncharacterized protein

Gene

RABGAP1L

Organism
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:RABGAP1LImported
OrganismiIctidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)Imported
Taxonomic identifieri43179 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciuromorphaSciuridaeXerinaeMarmotiniIctidomys
Proteomesi
  • UP000005215 Componenti: Unassembled WGS sequence

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili126 – 206Sequence analysisAdd BLAST81
Coiled coili211 – 245Sequence analysisAdd BLAST35
Coiled coili284 – 339Sequence analysisAdd BLAST56

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00750000117238

Family and domain databases

InterProiView protein in InterPro
IPR033185 RabGAP1
PANTHERiPTHR22957:SF205 PTHR22957:SF205, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.Show allAlign All

A0A287D0X5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEEGVPCPAP AAKLTPPVKK SQDMHDERSK LVNEYACRVL ELLGMGHRLF
60 70 80 90 100
VPRLLATSKE DLLQADFEGA LKFFRVQLPK RYRAEENARR LMEQACNIKV
110 120 130 140 150
PTKKLKKYEK EYQTMRESQL QQEDPMDRYK RENRRLQEAS MRLEQENDDL
160 170 180 190 200
AHELVTSKIA LRNDLDQAED KADVLNKELL LTKQKLVETE EEKRKQEEET
210 220 230 240 250
AQLKEVFRKQ LEKAEYEIKK TTAIIAEYKQ ICSQLSTRLE KQQAASKEEL
260 270 280 290 300
EAVKGKMMAC KHCSDIFSKE GTLKPAAISR EDQGIEADDE KDSLKKQLRE
310 320 330 340 350
MELELAQTKL QLVEAKCKIQ ELEHQRGALM NEIQAAKNSW FSKTLNSIKT
360 370
ATSTQPLQPP QATQPPKEST
Length:370
Mass (Da):42,718
Last modified:November 22, 2017 - v1
Checksum:i443783102036F88B
GO

Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A287D6J0A0A287D6J0_ICTTR
Uncharacterized protein
RABGAP1L
1,059Annotation score:
I3LZZ3I3LZZ3_ICTTR
Uncharacterized protein
RABGAP1L
824Annotation score:
A0A287D8I9A0A287D8I9_ICTTR
Uncharacterized protein
RABGAP1L
813Annotation score:
A0A287CT47A0A287CT47_ICTTR
Uncharacterized protein
RABGAP1L
458Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01014969 Genomic DNA No translation available.
AGTP01014970 Genomic DNA No translation available.
AGTP01014971 Genomic DNA No translation available.
AGTP01014972 Genomic DNA No translation available.
AGTP01014973 Genomic DNA No translation available.
AGTP01014974 Genomic DNA No translation available.
AGTP01014975 Genomic DNA No translation available.
AGTP01014976 Genomic DNA No translation available.
AGTP01014977 Genomic DNA No translation available.
RefSeqiXP_005319839.1, XM_005319782.2

Genome annotation databases

EnsembliENSSTOT00000036091; ENSSTOP00000027179; ENSSTOG00000002212
GeneIDi101960740

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01014969 Genomic DNA No translation available.
AGTP01014970 Genomic DNA No translation available.
AGTP01014971 Genomic DNA No translation available.
AGTP01014972 Genomic DNA No translation available.
AGTP01014973 Genomic DNA No translation available.
AGTP01014974 Genomic DNA No translation available.
AGTP01014975 Genomic DNA No translation available.
AGTP01014976 Genomic DNA No translation available.
AGTP01014977 Genomic DNA No translation available.
RefSeqiXP_005319839.1, XM_005319782.2

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSTOT00000036091; ENSSTOP00000027179; ENSSTOG00000002212
GeneIDi101960740

Organism-specific databases

CTDi9910

Phylogenomic databases

GeneTreeiENSGT00750000117238

Family and domain databases

InterProiView protein in InterPro
IPR033185 RabGAP1
PANTHERiPTHR22957:SF205 PTHR22957:SF205, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A287D0X5_ICTTR
AccessioniPrimary (citable) accession number: A0A287D0X5
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2017
Last sequence update: November 22, 2017
Last modified: November 7, 2018
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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