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Protein
Submitted name:

Uncharacterized protein

Gene

PSD3

Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:PSD3Imported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome 17

Expressioni

Gene expression databases

ExpressionAtlasiA0A287AHS5 baseline and differential

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini481 – 666SEC7InterPro annotationAdd BLAST186
Domaini717 – 830PHInterPro annotationAdd BLAST114

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili858 – 878Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00920000149004

Family and domain databases

CDDicd00171 Sec7, 1 hit
Gene3Di1.10.1000.11, 1 hit
2.30.29.30, 1 hit
InterProiView protein in InterPro
IPR011993 PH-like_dom_sf
IPR001849 PH_domain
IPR023394 Sec7_C_sf
IPR000904 Sec7_dom
IPR035999 Sec7_dom_sf
PfamiView protein in Pfam
PF01369 Sec7, 1 hit
SMARTiView protein in SMART
SM00233 PH, 1 hit
SM00222 Sec7, 1 hit
SUPFAMiSSF48425 SSF48425, 1 hit
PROSITEiView protein in PROSITE
PS50003 PH_DOMAIN, 1 hit
PS50190 SEC7, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All

A0A287AHS5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEESGEGLRA SLDFDAEPLP CRPQGQQGVQ LLAGHPPGLV SVTGGPKDIG
60 70 80 90 100
QAPSQSHLKE QSLQPIDSLI SALKATEARI ASGTLQATKV QDRDALPGFS
110 120 130 140 150
GQQVEQEPDT ASHKTQRANK PFPAGREKSP KIPLSAEVTT EDSIYLSIQK
160 170 180 190 200
DLTALLTGEA EAELSRAAAR GQKEAVLVRE PACPASFEGG LETHSSASGA
210 220 230 240 250
SLLRERRSDQ GREHPGCGGR GSSSGHQGHV KHVGFQGVEI LWTGGEGRET
260 270 280 290 300
RLPVDVPTSR ERTAPPESTA FSKGPGRLVS PAAQCHSAGL PESVWDDAQG
310 320 330 340 350
APSEAPATGS GPFPPVPLLE SGEDEVFLRE NKEHLEKPEL EKDRERVLEQ
360 370 380 390 400
EEHFRGGDDD VLGSAYAEDS TDVYSSQFET ILDNTSLYYS AESLETLYSE
410 420 430 440 450
PDSYFSFEMP LTPMIQQRIK EGGQFLDRTS MGGQQDVLSI SADGGIVMGY
460 470 480 490 500
SGGITNGLSG SSNSIYTKGT PEIAFWGSNA GVKTALLEAH SEMGSTEILE
510 520 530 540 550
KETSGSLSNG TSSNVEAAKR LAKRLYQLDR FKRSDVAKHL GKNNEFSRLV
560 570 580 590 600
AEEYLKFFDF TGMTLDQSLR YFFKAFSLVG ETQERERVLI HFSNRYFYCN
610 620 630 640 650
PDTIASQDGV HCLTCAVMLL NTDLHGHNIG KKMTCQEFIA NLQGVDEGGD
660 670 680 690 700
FSKDLLKALY NSIKNEKLEW AVDDEEKKKS LSEGTDEKAN GTHPKTISRI
710 720 730 740 750
GSTTNPFLDI PHDPNAAVYK SGFLARKIHA DMDGKKTPRG KRGWKTFYAV
760 770 780 790 800
LKGTVLYLQK DEYKPEKALS EEDLKNAVSV HHALASQATD YEKKPNVLKL
810 820 830 840 850
KTADWRVLLF QAQSPEEMQG WINKINCVAA VFSAPPFPAA IGSQKKFSRP
860 870 880 890 900
LLPATTTKLS QEEQLKSHES KLKQISTELA EHRSYPPDKK VKAKEVDEYR
910 920 930 940 950
LKDHYLEFEK TRYEVYVRVL KEGGAELLGS GGPAGLKKSH SSPSLNPDSS
960 970
PVTAKVKRNV SERKDHRPET PSIKQKVT
Length:978
Mass (Da):107,095
Last modified:November 22, 2017 - v1
Checksum:i74D918E83F404015
GO

Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F1SE18F1SE18_PIG
Uncharacterized protein
PSD3
1,010Annotation score:
I3L6H3I3L6H3_PIG
Uncharacterized protein
PSD3
510Annotation score:
A0A287A9D5A0A287A9D5_PIG
Uncharacterized protein
PSD3
1,278Annotation score:
A0A287ANS7A0A287ANS7_PIG
Uncharacterized protein
PSD3
1,043Annotation score:
A0A287AUU8A0A287AUU8_PIG
Uncharacterized protein
PSD3
1,100Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000105 Genomic DNA No translation available.
RefSeqiXP_013840483.1, XM_013985029.1
UniGeneiSsc.102445

Genome annotation databases

EnsembliENSSSCT00000046428; ENSSSCP00000043434; ENSSSCG00000007034
GeneIDi100623956

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000105 Genomic DNA No translation available.
RefSeqiXP_013840483.1, XM_013985029.1
UniGeneiSsc.102445

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSSCT00000046428; ENSSSCP00000043434; ENSSSCG00000007034
GeneIDi100623956

Organism-specific databases

CTDi23362

Phylogenomic databases

GeneTreeiENSGT00920000149004

Gene expression databases

ExpressionAtlasiA0A287AHS5 baseline and differential

Family and domain databases

CDDicd00171 Sec7, 1 hit
Gene3Di1.10.1000.11, 1 hit
2.30.29.30, 1 hit
InterProiView protein in InterPro
IPR011993 PH-like_dom_sf
IPR001849 PH_domain
IPR023394 Sec7_C_sf
IPR000904 Sec7_dom
IPR035999 Sec7_dom_sf
PfamiView protein in Pfam
PF01369 Sec7, 1 hit
SMARTiView protein in SMART
SM00233 PH, 1 hit
SM00222 Sec7, 1 hit
SUPFAMiSSF48425 SSF48425, 1 hit
PROSITEiView protein in PROSITE
PS50003 PH_DOMAIN, 1 hit
PS50190 SEC7, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A287AHS5_PIG
AccessioniPrimary (citable) accession number: A0A287AHS5
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2017
Last sequence update: November 22, 2017
Last modified: October 10, 2018
This is version 9 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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