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Protein
Submitted name:

Uncharacterized protein

Gene

LRRFIP1

Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:LRRFIP1Imported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome 15

Expressioni

Gene expression databases

ExpressionAtlasiA0A286ZZI6 baseline and differential

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili35 – 62Sequence analysisAdd BLAST28
Coiled coili93 – 127Sequence analysisAdd BLAST35
Coiled coili135 – 169Sequence analysisAdd BLAST35
Coiled coili173 – 193Sequence analysisAdd BLAST21
Coiled coili243 – 274Sequence analysisAdd BLAST32
Coiled coili295 – 371Sequence analysisAdd BLAST77

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00530000063564

Family and domain databases

InterProiView protein in InterPro
IPR019139 LRRFIP1/2
PANTHERiPTHR19212 PTHR19212, 1 hit
PfamiView protein in Pfam
PF09738 LRRFIP, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 6 potential isoforms that are computationally mapped.Show allAlign All

A0A286ZZI6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTNPAATQNK EIECLSPEAQ KLAEARLAAK RAARAEAREI RMKELERQQK
60 70 80 90 100
EVEERSEKDF EKGSRSLPSL SAATLASLGG TSSRRGSGDT SISLDTEASI
110 120 130 140 150
REIKDSLAEA EEKYKKAMVS NAQLDNEKTN FMYQVDTLKD VLLELEEQLA
160 170 180 190 200
ESRRQLEEKS KEFEREKHAH SILQFQFAEV KEALKQREEL LEKHGIILNS
210 220 230 240 250
ETATNGETSD PLSRVEHPGS TKMTKEEVGA PQAPGDGTLD IRLKKLVDER
260 270 280 290 300
EGLLEQIKKL RGQLEERQKN VRLDSLRPED GVLENGTDVH VMDLHRDANR
310 320 330 340 350
QISDLKFKLA KSEQEITALE QNVIRLESQV SRYKLAAENA EKIEDELKAE
360 370 380 390
KRKLQRELRS ALDKTEELEV SNGHLVKRLE KMKANRSVHL SQQ
Length:393
Mass (Da):44,626
Last modified:November 22, 2017 - v1
Checksum:iEEA566D31C43D68D
GO

Computationally mapped potential isoform sequencesi

There are 6 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F1SJI5F1SJI5_PIG
Uncharacterized protein
LRRFIP1
636Annotation score:
I3LUF5I3LUF5_PIG
Uncharacterized protein
LRRFIP1
640Annotation score:
F1SJI2F1SJI2_PIG
Uncharacterized protein
LRRFIP1
661Annotation score:
A0A287B990A0A287B990_PIG
Uncharacterized protein
LRRFIP1
420Annotation score:
A0A286ZP61A0A286ZP61_PIG
Uncharacterized protein
LRRFIP1
622Annotation score:
A0A287BIH9A0A287BIH9_PIG
Uncharacterized protein
LRRFIP1
509Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000101 Genomic DNA No translation available.
RefSeqiXP_005672380.1, XM_005672323.2
UniGeneiSsc.10291

Genome annotation databases

EnsembliENSSSCT00000047141; ENSSSCP00000037054; ENSSSCG00000016330
GeneIDi100517377

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000101 Genomic DNA No translation available.
RefSeqiXP_005672380.1, XM_005672323.2
UniGeneiSsc.10291

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSSCT00000047141; ENSSSCP00000037054; ENSSSCG00000016330
GeneIDi100517377

Organism-specific databases

CTDi9208

Phylogenomic databases

GeneTreeiENSGT00530000063564

Gene expression databases

ExpressionAtlasiA0A286ZZI6 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR019139 LRRFIP1/2
PANTHERiPTHR19212 PTHR19212, 1 hit
PfamiView protein in Pfam
PF09738 LRRFIP, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A286ZZI6_PIG
AccessioniPrimary (citable) accession number: A0A286ZZI6
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2017
Last sequence update: November 22, 2017
Last modified: October 10, 2018
This is version 6 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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