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Protein
Submitted name:

Cleft lip and palate transmembrane protein 1-like protein

Gene

CLPTM1L

Organism
Castor canadensis (Beaver)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Cleft lip and palate transmembrane protein 1-like proteinImported
Gene namesi
Name:CLPTM1LImported
OrganismiCastor canadensis (Beaver)Imported
Taxonomic identifieri51338 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaCastorimorphaCastoridaeCastor

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 32HelicalSequence analysisAdd BLAST21
Transmembranei285 – 306HelicalSequence analysisAdd BLAST22
Transmembranei327 – 342HelicalSequence analysisAdd BLAST16
Transmembranei404 – 422HelicalSequence analysisAdd BLAST19
Transmembranei428 – 450HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Membrane

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR008429 CLPTM1
IPR030434 CLPTM1L
PANTHERiPTHR21347 PTHR21347, 1 hit
PTHR21347:SF0 PTHR21347:SF0, 1 hit
PfamiView protein in Pfam
PF05602 CLPTM1, 1 hit

Sequencei

Sequence statusi: Complete.

A0A250YJT2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MWSGRSSFTS LVVGVFVVYV VHTCWVMYGI VYTRPCAGDS NCIQPYLARR
60 70 80 90 100
PKLQLSVYTT TRSSLGAENN VDLVLNVEDF DVESKFERTV NVSVPKKTRN
110 120 130 140 150
NGTLYAYIFL HHAGIPPWHD GKQVHLVSPL TTYMIPKPEE INLLTGESAS
160 170 180 190 200
QQQIEAEKKP SNALDEPVSH WRPRLTLNVM VDNFVFDGSS LPADVHRYMK
210 220 230 240 250
MIQLGETVHY LPILFIDQLS NRVKDLMVIN RSTTELPLTV SYDKISLGRL
260 270 280 290 300
RFWIHMQDAV YSLQQFGFSE KDADEVKGIF VDTNLYFLAL TFFVAAFHLL
310 320 330 340 350
FDFLAFKNDI SFWKKKKSMI GMSTKAVLWR CFSTVVIFLF LLDEQTSLLV
360 370 380 390 400
LVPAGVGAAI ELWKVKKALK MTVAWRGLMP WFQFGTCSES ERKTEEYDAQ
410 420 430 440 450
AMKYLSYLLY PLCIGGAVYS LLNIKYKSWY SWLINSFVNG VYAFGFLFML
460 470 480 490 500
PQLFVNYKMK SVAHLPWKAF TYKAFNTFID DVFAFIITMP TSHRLACFRD
510 520 530
DVVFLVYLYQ RWLYPVDKSR VNEFGESYEE QPKRKSHAD
Length:539
Mass (Da):62,243
Last modified:November 22, 2017 - v1
Checksum:i2213718373B32296
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GFFW01000989 Transcribed RNA Translation: JAV43799.1
RefSeqiXP_020037933.1, XM_020182344.1

Genome annotation databases

GeneIDi109698259
KEGGiccan:109698259

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GFFW01000989 Transcribed RNA Translation: JAV43799.1
RefSeqiXP_020037933.1, XM_020182344.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi109698259
KEGGiccan:109698259

Organism-specific databases

CTDi81037

Family and domain databases

InterProiView protein in InterPro
IPR008429 CLPTM1
IPR030434 CLPTM1L
PANTHERiPTHR21347 PTHR21347, 1 hit
PTHR21347:SF0 PTHR21347:SF0, 1 hit
PfamiView protein in Pfam
PF05602 CLPTM1, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A250YJT2_CASCN
AccessioniPrimary (citable) accession number: A0A250YJT2
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2017
Last sequence update: November 22, 2017
Last modified: November 7, 2018
This is version 6 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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